Variant report

Variant rs3825613
Chromosome Location chr14:55593172-55593173
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55570000-55594800 Enhancers Fetal Intestine Large intestine
2 chr14:55577600-55594800 Enhancers Fetal Intestine Small intestine
3 chr14:55582200-55595600 Enhancers Primary monocytes fromperipheralblood blood
4 chr14:55586000-55593600 Enhancers Left Ventricle heart
5 chr14:55587000-55595600 Enhancers Stomach Mucosa stomach
6 chr14:55587600-55595600 Enhancers Fetal Heart heart
7 chr14:55588800-55594400 Enhancers Adipose Nuclei Adipose
8 chr14:55589200-55593400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
9 chr14:55589600-55593200 Enhancers Small Intestine intestine
10 chr14:55589600-55594600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr14:55589800-55593200 Enhancers Sigmoid Colon Sigmoid Colon
12 chr14:55589800-55594000 Weak transcription HSMM muscle
13 chr14:55589800-55595600 Weak transcription Colon Smooth Muscle Colon
14 chr14:55590000-55593800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr14:55590000-55595400 Weak transcription Stomach Smooth Muscle stomach
16 chr14:55590000-55595600 Weak transcription Rectal Smooth Muscle rectum
17 chr14:55590000-55595600 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr14:55590200-55593200 Enhancers Colonic Mucosa Colon
19 chr14:55590200-55593800 Enhancers Duodenum Mucosa Duodenum
20 chr14:55590200-55594000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr14:55590200-55595800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr14:55590400-55593800 Weak transcription Muscle Satellite Cultured Cells --
23 chr14:55590400-55593800 Weak transcription NHDF-Ad bronchial
24 chr14:55590400-55595000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr14:55590400-55595600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr14:55590600-55593600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr14:55590600-55593600 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr14:55590800-55593400 Enhancers Hela-S3 cervix
29 chr14:55590800-55593600 Weak transcription Osteobl bone
30 chr14:55590800-55594200 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr14:55590800-55596200 Weak transcription Fetal Lung lung
32 chr14:55591000-55594000 Weak transcription NH-A brain
33 chr14:55591000-55594200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr14:55591400-55593600 Enhancers Primary Natural Killer cells fromperipheralblood blood
35 chr14:55591600-55595400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr14:55591600-55595400 Enhancers Primary neutrophils fromperipheralblood blood
37 chr14:55591600-55595600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr14:55591800-55593200 Enhancers Primary T helper 17 cells PMA-I stimulated --
39 chr14:55591800-55593600 Enhancers Ovary ovary
40 chr14:55591800-55595000 Enhancers Breast Myoepithelial Primary Cells Breast
41 chr14:55592000-55593200 Enhancers GM12878-XiMat blood
42 chr14:55592200-55593200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
43 chr14:55592200-55593200 Enhancers NHLF lung
44 chr14:55592400-55593800 Weak transcription HMEC breast
45 chr14:55592400-55595400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr14:55592400-55595600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr14:55592400-55595600 Weak transcription K562 blood
48 chr14:55592600-55593200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
49 chr14:55592600-55593200 Enhancers Rectal Mucosa Donor 29 rectum
50 chr14:55592600-55593600 Weak transcription Placenta Amnion Placenta Amnion

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