The 2.0 version of rSNPBase

Variant report

Variant rs58402577
Chromosome Location chr11:75775157-75775158
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:75716800-75778200 Weak transcription Ovary ovary
2 chr11:75736800-75777000 Weak transcription Duodenum Mucosa Duodenum
3 chr11:75740200-75776600 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr11:75740200-75779000 Weak transcription Fetal Muscle Leg muscle
5 chr11:75742400-75784800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr11:75742400-75785400 Weak transcription Brain Angular Gyrus brain
7 chr11:75743000-75784800 Weak transcription Brain Substantia Nigra brain
8 chr11:75744000-75803200 Weak transcription Aorta Aorta
9 chr11:75748800-75780800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr11:75748800-75794400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr11:75755400-75779200 Weak transcription Right Ventricle heart
12 chr11:75755800-75776800 Weak transcription Left Ventricle heart
13 chr11:75759400-75778200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr11:75760000-75776000 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr11:75760000-75777800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr11:75760200-75776800 Weak transcription Stomach Smooth Muscle stomach
17 chr11:75760400-75778000 Weak transcription Fetal Thymus thymus
18 chr11:75760400-75784800 Weak transcription Brain Inferior Temporal Lobe brain
19 chr11:75760600-75776800 Weak transcription Placenta Placenta
20 chr11:75760600-75788400 Weak transcription Primary T helper cells PMA-I stimulated --
21 chr11:75760800-75777000 Weak transcription Fetal Lung lung
22 chr11:75760800-75785200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr11:75761000-75776400 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr11:75761000-75778200 Weak transcription Thymus Thymus
25 chr11:75761000-75784200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr11:75761200-75776600 Weak transcription Primary hematopoietic stem cells blood
27 chr11:75761200-75776600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr11:75761200-75778200 Weak transcription Spleen Spleen
29 chr11:75761200-75780000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr11:75761200-75780200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr11:75761600-75776600 Weak transcription HUVEC blood vessel
32 chr11:75762800-75782400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr11:75763200-75775400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr11:75763200-75776600 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr11:75763400-75778200 Weak transcription HepG2 liver
36 chr11:75763600-75776000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr11:75763600-75776800 Weak transcription Primary T cells from cord blood blood
38 chr11:75763600-75777400 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr11:75763600-75778200 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr11:75763600-75780200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr11:75763600-75784200 Weak transcription Gastric stomach
42 chr11:75764400-75788400 Weak transcription Rectal Smooth Muscle rectum
43 chr11:75764400-75807400 Weak transcription NHEK skin
44 chr11:75764800-75778800 Weak transcription HSMMtube muscle
45 chr11:75765400-75784400 Weak transcription Brain Hippocampus Middle brain
46 chr11:75766000-75776600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr11:75768600-75778800 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr11:75768800-75777800 Weak transcription Colon Smooth Muscle Colon
49 chr11:75768800-75778800 Weak transcription H9 Cell Line embryonic stem cell
50 chr11:75768800-75781600 Weak transcription Esophagus oesophagus

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Last update: Aug 31, 2015