The 2.0 version of rSNPBase

Variant report

Variant rs61624710
Chromosome Location chr11:75779031-75779032
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:75742400-75784800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
2 chr11:75742400-75785400 Weak transcription Brain Angular Gyrus brain
3 chr11:75743000-75784800 Weak transcription Brain Substantia Nigra brain
4 chr11:75744000-75803200 Weak transcription Aorta Aorta
5 chr11:75748800-75780800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr11:75748800-75794400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr11:75755400-75779200 Weak transcription Right Ventricle heart
8 chr11:75760400-75784800 Weak transcription Brain Inferior Temporal Lobe brain
9 chr11:75760600-75788400 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr11:75760800-75785200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr11:75761000-75784200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr11:75761200-75780000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr11:75761200-75780200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr11:75762800-75782400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr11:75763600-75780200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr11:75763600-75784200 Weak transcription Gastric stomach
17 chr11:75764400-75788400 Weak transcription Rectal Smooth Muscle rectum
18 chr11:75764400-75807400 Weak transcription NHEK skin
19 chr11:75765400-75784400 Weak transcription Brain Hippocampus Middle brain
20 chr11:75768800-75781600 Weak transcription Esophagus oesophagus
21 chr11:75770000-75785200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr11:75770400-75780000 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr11:75770400-75784200 Weak transcription NHLF lung
24 chr11:75770800-75788400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr11:75770800-75796800 Weak transcription Psoas Muscle Psoas
26 chr11:75771000-75784600 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr11:75771200-75784800 Weak transcription NH-A brain
28 chr11:75771200-75785400 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr11:75771400-75788600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr11:75771800-75827000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr11:75772800-75783600 Weak transcription Brain Germinal Matrix brain
32 chr11:75774200-75781400 Strong transcription Primary B cells from cord blood blood
33 chr11:75774400-75794400 Weak transcription Placenta Amnion Placenta Amnion
34 chr11:75775200-75781200 Strong transcription Primary B cells from peripheral blood blood
35 chr11:75775200-75784400 Weak transcription Osteobl bone
36 chr11:75775200-75794600 Weak transcription Hela-S3 cervix
37 chr11:75775400-75782000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr11:75775600-75780800 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr11:75775600-75781800 Weak transcription Small Intestine intestine
40 chr11:75775600-75788600 Weak transcription Brain Anterior Caudate brain
41 chr11:75776000-75779800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr11:75776000-75781000 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr11:75776000-75781000 Strong transcription Primary T helper cells fromperipheralblood blood
44 chr11:75776200-75781200 Weak transcription iPS-20b Cell Line embryonic stem cell
45 chr11:75776200-75784000 Strong transcription GM12878-XiMat blood
46 chr11:75776400-75779200 Strong transcription Primary T helper naive cells fromperipheralblood blood
47 chr11:75776400-75779400 Strong transcription Primary T cells fromperipheralblood blood
48 chr11:75776400-75784800 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr11:75776600-75779200 Strong transcription Rectal Mucosa Donor 29 rectum
50 chr11:75776600-75779400 Strong transcription Primary hematopoietic stem cells short term culture blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015