Variant report

Variant	rs7151235
Chromosome Location	chr14:68561634-68561635
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:68559348..68562208-chr14:68567307..68571159,3	MCF-7	breast:
2	chr14:68560697..68562735-chr14:68604921..68607630,2	MCF-7	breast:

Extended variants
information (count: 68 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:67)

rs_ID	r²[population]
rs10137233	0.82[ASN][1000 genomes]
rs10139236	0.89[CHB][hapmap];0.82[ASN][1000 genomes]
rs10139386	0.89[CHB][hapmap];0.82[ASN][1000 genomes]
rs10140420	0.82[ASN][1000 genomes]
rs10140493	0.82[ASN][1000 genomes]
rs10151115	0.82[ASN][1000 genomes]
rs1080956	0.82[ASN][1000 genomes]
rs1080957	0.82[ASN][1000 genomes]
rs1080958	0.89[CHB][hapmap];0.82[ASN][1000 genomes]
rs11158718	0.87[EUR][1000 genomes]
rs11158719	0.89[CHB][hapmap];0.82[ASN][1000 genomes]
rs11623467	0.89[CHB][hapmap];0.82[ASN][1000 genomes]
rs11624209	0.82[ASN][1000 genomes]
rs11624484	0.86[CEU][hapmap];0.85[EUR][1000 genomes]
rs11628745	0.82[ASN][1000 genomes]
rs11629073	0.82[EUR][1000 genomes]
rs12436203	0.83[EUR][1000 genomes]
rs12437043	0.84[CHB][hapmap];0.84[AMR][1000 genomes]
rs1548264	0.89[CHB][hapmap];0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs1548265	0.89[CHB][hapmap];0.82[ASN][1000 genomes]
rs17104889	0.89[CHB][hapmap];0.82[ASN][1000 genomes]
rs17104908	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1810639	0.82[ASN][1000 genomes]
rs1951410	0.82[EUR][1000 genomes]
rs2588830	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs2588831	0.89[AMR][1000 genomes]
rs2588832	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs2588833	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2588835	0.86[AMR][1000 genomes]
rs2767366	0.89[AMR][1000 genomes]
rs2767367	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs33949561	0.82[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs34558039	0.81[EUR][1000 genomes]
rs365934	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs372143	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs373918	0.80[CEU][hapmap];0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs378408	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs401021	0.80[CEU][hapmap];0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs408156	0.88[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs411547	0.80[CEU][hapmap];0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs419450	0.82[EUR][1000 genomes]
rs424032	0.87[AMR][1000 genomes]
rs431649	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs435620	0.80[CEU][hapmap];0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs437585	0.80[CEU][hapmap];0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs440627	0.82[EUR][1000 genomes]
rs445921	0.82[EUR][1000 genomes]
rs448445	0.80[CEU][hapmap];0.82[EUR][1000 genomes]
rs4899231	0.82[ASN][1000 genomes]
rs4899232	0.82[ASN][1000 genomes]
rs4902547	0.82[ASN][1000 genomes]
rs67566613	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs68139749	0.82[ASN][1000 genomes]
rs7141160	0.82[EUR][1000 genomes]
rs7141450	0.80[CEU][hapmap];0.82[EUR][1000 genomes]
rs7150168	0.89[CHB][hapmap];0.81[ASN][1000 genomes]
rs7156822	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs72725183	0.83[EUR][1000 genomes]
rs72725185	0.86[EUR][1000 genomes]
rs72725186	0.87[EUR][1000 genomes]
rs72725187	0.86[EUR][1000 genomes]
rs72725188	0.86[EUR][1000 genomes]
rs72725190	0.82[ASN][1000 genomes]
rs8011621	0.81[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs8014000	0.89[CHB][hapmap];0.82[ASN][1000 genomes]
rs8014524	0.82[EUR][1000 genomes]
rs9323502	0.82[AMR][1000 genomes];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68547200-68567400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr14:68556400-68568400	Weak transcription	Primary T cells from cord blood	blood
3	chr14:68556600-68561800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr14:68556600-68565400	Weak transcription	Primary hematopoietic stem cells	blood
5	chr14:68556600-68568000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr14:68557000-68562800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr14:68557000-68565600	Weak transcription	Fetal Lung	lung
8	chr14:68561000-68562200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr14:68561400-68561800	Enhancers	Fetal Kidney	kidney
10	chr14:68561400-68561800	Enhancers	Rectal Smooth Muscle	rectum
11	chr14:68561400-68561800	Enhancers	NHDF-Ad	bronchial
12	chr14:68561400-68563400	Enhancers	Colon Smooth Muscle	Colon
13	chr14:68561600-68563000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr14:68561600-68568200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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