The 2.0 version of rSNPBase

Variant report

Variant rs72640001
Chromosome Location chr10:98033839-98033840
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:98031000-98034600 Enhancers Primary hematopoietic stem cells short term culture blood
2 chr10:98031400-98034000 Enhancers Primary monocytes fromperipheralblood blood
3 chr10:98031400-98035600 Weak transcription Colon Smooth Muscle Colon
4 chr10:98031400-98035600 Weak transcription Stomach Smooth Muscle stomach
5 chr10:98031600-98034200 Enhancers Fetal Intestine Large intestine
6 chr10:98031600-98035600 Weak transcription Dnd41 blood
7 chr10:98032400-98047200 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr10:98032600-98035400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr10:98032600-98035400 Weak transcription Small Intestine intestine
10 chr10:98032800-98035600 Weak transcription Esophagus oesophagus
11 chr10:98032800-98035600 Weak transcription Fetal Kidney kidney
12 chr10:98032800-98035600 Weak transcription Gastric stomach
13 chr10:98032800-98035600 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr10:98033000-98035200 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr10:98033000-98035200 Weak transcription Pancreas Pancrea
16 chr10:98033000-98035800 Weak transcription Spleen Spleen
17 chr10:98033000-98036200 Weak transcription Colonic Mucosa Colon
18 chr10:98033200-98034000 Enhancers Primary hematopoietic stem cells blood
19 chr10:98033200-98034200 Enhancers Monocytes-CD14+_RO01746 blood
20 chr10:98033200-98034400 Enhancers Rectal Mucosa Donor 29 rectum
21 chr10:98033200-98035200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr10:98033200-98035200 Weak transcription Liver Liver
23 chr10:98033200-98035200 Weak transcription HMEC breast
24 chr10:98033200-98035400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr10:98033200-98035400 Weak transcription NHEK skin
26 chr10:98033200-98035600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr10:98033200-98035600 Weak transcription Fetal Lung lung
28 chr10:98033200-98035600 Weak transcription Stomach Mucosa stomach
29 chr10:98033400-98035400 Weak transcription Adipose Nuclei Adipose
30 chr10:98033400-98035400 Weak transcription Duodenum Mucosa Duodenum
31 chr10:98033400-98035400 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr10:98033400-98035800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr10:98033400-98037800 Enhancers Primary B cells from peripheral blood blood
34 chr10:98033600-98034000 Weak transcription Placenta Amnion Placenta Amnion
35 chr10:98033600-98035600 Weak transcription Fetal Intestine Small intestine
36 chr10:98033600-98037400 Enhancers Primary B cells from cord blood blood
37 chr10:98033800-98034400 Flanking Active TSS GM12878-XiMat blood

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Last update: Aug 31, 2015