Variant report

Variant	rs17712683
Chromosome Location	chr5:57855056-57855057
allele	A/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 66 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:66)

rs_ID	r²[population]
rs10035587	0.95[CEU][hapmap];0.82[EUR][1000 genomes]
rs10056043	0.82[EUR][1000 genomes]
rs10071540	0.82[EUR][1000 genomes]
rs10071783	0.95[CEU][hapmap];0.82[EUR][1000 genomes]
rs10074748	0.82[EUR][1000 genomes]
rs10472062	0.82[EUR][1000 genomes]
rs11739694	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11741689	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11742549	1.00[CEU][hapmap]
rs11745321	0.95[CEU][hapmap];0.82[EUR][1000 genomes]
rs11746501	0.95[CEU][hapmap];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11747268	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11747708	0.95[CEU][hapmap];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11948189	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11949041	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11949753	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11950095	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11957466	1.00[ASN][1000 genomes]
rs11958256	1.00[ASN][1000 genomes]
rs12173136	0.82[EUR][1000 genomes]
rs12187683	0.81[EUR][1000 genomes]
rs12188785	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12518781	1.00[ASN][1000 genomes]
rs13159762	1.00[ASN][1000 genomes]
rs13168504	1.00[ASN][1000 genomes]
rs13168895	1.00[ASN][1000 genomes]
rs13174477	1.00[ASN][1000 genomes]
rs13184050	0.85[ASN][1000 genomes]
rs15915	1.00[ASN][1000 genomes]
rs1605739	1.00[CEU][hapmap];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1605740	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1605741	1.00[CEU][hapmap]
rs1605742	1.00[CEU][hapmap]
rs17712713	1.00[CEU][hapmap]
rs17712820	1.00[CEU][hapmap]
rs17773396	0.95[CEU][hapmap];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4700297	1.00[ASN][1000 genomes]
rs57367646	0.82[EUR][1000 genomes]
rs57844100	0.92[ASN][1000 genomes]
rs59598546	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62366360	1.00[ASN][1000 genomes]
rs62366396	1.00[ASN][1000 genomes]
rs62366397	1.00[ASN][1000 genomes]
rs62366400	1.00[ASN][1000 genomes]
rs62366401	1.00[ASN][1000 genomes]
rs62366402	1.00[ASN][1000 genomes]
rs62366403	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62366404	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62366441	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62366446	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62366447	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62366448	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62367805	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6865094	0.95[CEU][hapmap];0.82[EUR][1000 genomes]
rs6869174	0.82[EUR][1000 genomes]
rs6870990	1.00[ASN][1000 genomes]
rs6889999	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6890117	0.94[CEU][hapmap];0.82[EUR][1000 genomes]
rs6890154	0.82[EUR][1000 genomes]
rs6890362	0.95[CEU][hapmap];0.82[EUR][1000 genomes]
rs6891534	0.95[CEU][hapmap];0.82[EUR][1000 genomes]
rs6895777	0.95[CEU][hapmap];0.82[EUR][1000 genomes]
rs6895889	0.95[CEU][hapmap];0.82[EUR][1000 genomes]
rs73094379	0.81[EUR][1000 genomes]
rs7721366	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs963615	1.00[ASN][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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