Variant report

Variant	rs2186392
Chromosome Location	chr8:102773913-102773914
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:102767254..102769678-chr8:102771935..102774760,3	MCF-7	breast:

Extended variants
information (count: 95 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:95)

rs_ID	r²[population]
rs10091905	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.84[YRI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10094868	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10094894	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10113785	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10216921	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.86[YRI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10505012	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.85[YRI][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1073373	0.96[CEU][hapmap];0.87[EUR][1000 genomes]
rs1074703	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1077500	1.00[CEU][hapmap];0.95[CHB][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1077998	1.00[CEU][hapmap];0.83[CHB][hapmap];0.85[JPT][hapmap];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10808377	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10808378	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10808379	0.84[CEU][hapmap]
rs10955274	0.95[CEU][hapmap];0.94[CHB][hapmap];0.90[JPT][hapmap];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10955275	1.00[EUR][1000 genomes]
rs1111884	1.00[CEU][hapmap];0.82[EUR][1000 genomes]
rs1111886	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs1125334	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1125335	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11782123	0.95[CEU][hapmap];0.93[EUR][1000 genomes]
rs12334693	0.84[CEU][hapmap]
rs12543380	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12545537	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs12550570	1.00[CEU][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1264933	0.83[CEU][hapmap]
rs12677525	0.96[CEU][hapmap];0.82[EUR][1000 genomes]
rs13251735	0.83[CEU][hapmap]
rs13252722	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13265954	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13267715	0.88[EUR][1000 genomes]
rs13268186	1.00[CEU][hapmap];0.95[CHB][hapmap];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13281055	1.00[CEU][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13281871	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13282456	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1465167	1.00[CEU][hapmap];0.94[CHB][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1557336	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs1573284	0.96[CEU][hapmap];0.84[CHB][hapmap];0.84[JPT][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17406994	0.95[CEU][hapmap];0.81[EUR][1000 genomes]
rs1893366	0.83[CEU][hapmap]
rs2004556	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2032121	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.82[YRI][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2154652	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2155942	0.83[CEU][hapmap]
rs2186393	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2212701	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2387616	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.86[YRI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2387617	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2387618	1.00[CEU][hapmap];0.84[CHB][hapmap];0.84[JPT][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2387619	1.00[CEU][hapmap];0.84[CHB][hapmap];0.85[JPT][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs28837777	0.81[EUR][1000 genomes]
rs2892324	0.95[CEU][hapmap];0.88[EUR][1000 genomes]
rs4379418	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4493882	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4576401	0.81[EUR][1000 genomes]
rs4734040	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4734593	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs4734594	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs4734595	0.96[CEU][hapmap];0.85[EUR][1000 genomes]
rs4734597	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6468792	0.96[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6468793	0.96[CEU][hapmap];0.82[EUR][1000 genomes]
rs6468794	0.96[CEU][hapmap];0.81[EUR][1000 genomes]
rs6468795	0.96[CEU][hapmap];0.85[EUR][1000 genomes]
rs6468796	0.96[CEU][hapmap];0.81[EUR][1000 genomes]
rs6468798	0.96[CEU][hapmap];0.81[EUR][1000 genomes]
rs6468799	0.96[CEU][hapmap];0.81[EUR][1000 genomes]
rs6987380	0.96[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6988793	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs6997574	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7000357	0.88[CEU][hapmap];0.82[EUR][1000 genomes]
rs7001437	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7002547	0.96[CEU][hapmap];0.94[CHB][hapmap];0.94[JPT][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7003041	0.95[CHB][hapmap];0.94[JPT][hapmap];0.89[ASN][1000 genomes]
rs7008826	0.91[CEU][hapmap];0.85[EUR][1000 genomes]
rs7009385	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7011941	0.88[CEU][hapmap];0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7012512	0.95[CEU][hapmap];0.81[EUR][1000 genomes]
rs7013506	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7015311	0.96[CEU][hapmap];0.81[EUR][1000 genomes]
rs7017754	0.96[CEU][hapmap];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7812876	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7813132	0.81[CEU][hapmap]
rs7827691	0.84[CEU][hapmap]
rs7830291	1.00[CEU][hapmap];0.95[CHB][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7835223	0.88[CEU][hapmap];0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7835485	0.96[CEU][hapmap];0.93[EUR][1000 genomes]
rs7838696	0.84[CEU][hapmap]
rs7844259	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7844292	0.95[CHB][hapmap];0.94[JPT][hapmap];0.88[ASN][1000 genomes]
rs7844599	0.96[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs8181022	0.84[CEU][hapmap]
rs8181025	0.88[CEU][hapmap];0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9297313	0.84[CEU][hapmap]
rs9693504	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9693531	1.00[CEU][hapmap];1.00[EUR][1000 genomes]

No data

Chromatin state (count:71 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:102761400-102781000	Weak transcription	Liver	Liver
2	chr8:102769000-102774800	Enhancers	Pancreatic Islets	Pancreatic Islet
3	chr8:102769600-102803000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
4	chr8:102770200-102774200	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr8:102770200-102774200	Enhancers	Brain Cingulate Gyrus	brain
6	chr8:102770200-102774200	Enhancers	Rectal Smooth Muscle	rectum
7	chr8:102770400-102774000	Enhancers	Brain Angular Gyrus	brain
8	chr8:102770400-102774000	Enhancers	Brain Substantia Nigra	brain
9	chr8:102770400-102774200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr8:102770400-102774200	Enhancers	Fetal Stomach	stomach
11	chr8:102770400-102774400	Enhancers	Cortex derived primary cultured neurospheres	brain
12	chr8:102770600-102786800	Weak transcription	Esophagus	oesophagus
13	chr8:102770800-102774000	Enhancers	Adipose Nuclei	Adipose
14	chr8:102770800-102774400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr8:102771000-102774200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr8:102771200-102774200	Enhancers	ES-I3 Cell Line	embryonic stem cell
17	chr8:102771200-102774600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr8:102771200-102775000	Enhancers	Fetal Muscle Leg	muscle
19	chr8:102771400-102774200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr8:102771400-102774200	Enhancers	Fetal Lung	lung
21	chr8:102771400-102774600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr8:102771600-102774000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr8:102771600-102774000	Enhancers	Duodenum Smooth Muscle	Duodenum
24	chr8:102771600-102774400	Enhancers	Colon Smooth Muscle	Colon
25	chr8:102771600-102774400	Enhancers	Psoas Muscle	Psoas
26	chr8:102771800-102774000	Enhancers	iPS-15b Cell Line	embryonic stem cell
27	chr8:102771800-102774000	Enhancers	Placenta Amnion	Placenta Amnion
28	chr8:102771800-102774000	Enhancers	Rectal Mucosa Donor 31	rectum
29	chr8:102771800-102774200	Enhancers	Left Ventricle	heart
30	chr8:102771800-102774200	Enhancers	Ovary	ovary
31	chr8:102771800-102774200	Enhancers	HSMMtube	muscle
32	chr8:102772000-102774000	Enhancers	Stomach Smooth Muscle	stomach
33	chr8:102772000-102774200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
34	chr8:102772000-102774200	Enhancers	Fetal Kidney	kidney
35	chr8:102772000-102774200	Enhancers	HSMM	muscle
36	chr8:102772000-102774400	Enhancers	Right Ventricle	heart
37	chr8:102772200-102774000	Enhancers	H1 Cell Line	embryonic stem cell
38	chr8:102772200-102774200	Enhancers	Brain Anterior Caudate	brain
39	chr8:102772200-102774200	Enhancers	Skeletal Muscle Male	skeletal muscle
40	chr8:102772200-102774400	Enhancers	Stomach Mucosa	stomach
41	chr8:102772400-102774200	Enhancers	Muscle Satellite Cultured Cells	--
42	chr8:102772400-102774200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
43	chr8:102772400-102774200	Enhancers	NHDF-Ad	bronchial
44	chr8:102772600-102774000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr8:102772800-102774000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
46	chr8:102772800-102774200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
47	chr8:102772800-102776200	Weak transcription	Fetal Brain Male	brain
48	chr8:102772800-102776400	Weak transcription	Brain Germinal Matrix	brain
49	chr8:102772800-102778800	Weak transcription	Fetal Muscle Trunk	muscle
50	chr8:102772800-102783400	Weak transcription	Aorta	Aorta

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