Variant report

Variant	rs57666908
Chromosome Location	chr1:94681766-94681767
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs1054626	0.83[EUR][1000 genomes]
rs11165103	0.88[EUR][1000 genomes]
rs11576824	0.97[ASN][1000 genomes]
rs12022859	0.83[EUR][1000 genomes]
rs12027548	0.82[EUR][1000 genomes]
rs12036085	0.82[EUR][1000 genomes]
rs12036495	0.94[ASN][1000 genomes]
rs12038745	0.86[EUR][1000 genomes]
rs12039546	0.86[EUR][1000 genomes]
rs12042509	0.83[EUR][1000 genomes]
rs12046536	0.91[EUR][1000 genomes]
rs12093742	0.88[EUR][1000 genomes]
rs12562103	0.83[EUR][1000 genomes]
rs12563826	0.82[EUR][1000 genomes]
rs12742802	0.97[ASN][1000 genomes]
rs1360365	0.88[EUR][1000 genomes]
rs1576592	0.89[EUR][1000 genomes]
rs1622451	0.81[EUR][1000 genomes]
rs1623248	0.81[EUR][1000 genomes]
rs1623314	0.81[EUR][1000 genomes]
rs1629275	0.87[EUR][1000 genomes]
rs1687947	0.89[EUR][1000 genomes]
rs1687950	0.88[EUR][1000 genomes]
rs17111191	0.97[ASN][1000 genomes]
rs17111408	0.82[EUR][1000 genomes]
rs17111419	0.83[EUR][1000 genomes]
rs17111426	0.83[EUR][1000 genomes]
rs17111436	0.83[EUR][1000 genomes]
rs1765636	0.81[EUR][1000 genomes]
rs1929131	0.81[EUR][1000 genomes]
rs1999270	0.89[EUR][1000 genomes]
rs1999271	0.89[EUR][1000 genomes]
rs2130899	0.83[EUR][1000 genomes]
rs2391472	0.88[EUR][1000 genomes]
rs34859529	1.00[ASN][1000 genomes]
rs35275815	0.89[EUR][1000 genomes]
rs3789690	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4543802	0.83[EUR][1000 genomes]
rs4847201	0.89[EUR][1000 genomes]
rs4847296	0.88[EUR][1000 genomes]
rs55961421	0.91[EUR][1000 genomes]
rs6541343	0.89[EUR][1000 genomes]
rs6541345	0.89[EUR][1000 genomes]
rs6662877	0.82[EUR][1000 genomes]
rs6673491	0.88[EUR][1000 genomes]
rs6675959	0.89[EUR][1000 genomes]
rs6681827	0.89[EUR][1000 genomes]
rs66918029	0.91[EUR][1000 genomes]
rs66961454	0.83[EUR][1000 genomes]
rs67180557	0.83[EUR][1000 genomes]
rs67554381	0.81[EUR][1000 genomes]
rs67612304	0.83[EUR][1000 genomes]
rs67807923	0.82[EUR][1000 genomes]
rs68193246	0.83[EUR][1000 genomes]
rs7412971	0.97[ASN][1000 genomes]
rs7413345	0.86[EUR][1000 genomes]
rs7415246	0.86[EUR][1000 genomes]
rs7515965	0.89[EUR][1000 genomes]
rs7520754	0.88[EUR][1000 genomes]
rs7525320	0.86[EUR][1000 genomes]
rs7533977	0.89[EUR][1000 genomes]
rs7554714	0.89[EUR][1000 genomes]

Chromatin state (count:49 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:94640000-94684800	Weak transcription	Spleen	Spleen
2	chr1:94642400-94684600	Weak transcription	Fetal Stomach	stomach
3	chr1:94644800-94684400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr1:94645000-94687600	Weak transcription	Pancreas	Pancrea
5	chr1:94649400-94684000	Weak transcription	Right Ventricle	heart
6	chr1:94668400-94687000	Weak transcription	HUES64 Cell Line	embryonic stem cell
7	chr1:94668600-94684400	Weak transcription	Psoas Muscle	Psoas
8	chr1:94668800-94699000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
9	chr1:94669400-94687600	Weak transcription	Gastric	stomach
10	chr1:94670000-94684000	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr1:94670400-94684400	Weak transcription	Skeletal Muscle Male	skeletal muscle
12	chr1:94670600-94684400	Weak transcription	Fetal Kidney	kidney
13	chr1:94670800-94686400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr1:94670800-94686400	Weak transcription	Placenta	Placenta
15	chr1:94673800-94682800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr1:94673800-94683000	Weak transcription	Left Ventricle	heart
17	chr1:94673800-94684400	Weak transcription	Lung	lung
18	chr1:94673800-94698600	Weak transcription	Fetal Muscle Trunk	muscle
19	chr1:94673800-94701000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr1:94674000-94697000	Weak transcription	HSMMtube	muscle
21	chr1:94675400-94684400	Weak transcription	Adipose Nuclei	Adipose
22	chr1:94676200-94682600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
23	chr1:94676200-94687600	Weak transcription	A549	lung
24	chr1:94676400-94683000	Weak transcription	Fetal Muscle Leg	muscle
25	chr1:94676400-94691600	Weak transcription	Cortex derived primary cultured neurospheres	brain
26	chr1:94676800-94684000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
27	chr1:94676800-94684600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr1:94678800-94683400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
29	chr1:94679200-94685000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
30	chr1:94679800-94682200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
31	chr1:94680000-94681800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
32	chr1:94680200-94682000	Genic enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
33	chr1:94680200-94683000	Genic enhancers	Muscle Satellite Cultured Cells	--
34	chr1:94680200-94683000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
35	chr1:94680400-94684000	Weak transcription	HepG2	liver
36	chr1:94680800-94682000	Enhancers	Osteobl	bone
37	chr1:94680800-94688200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr1:94681000-94681800	Enhancers	Fetal Heart	heart
39	chr1:94681000-94682200	Genic enhancers	NHDF-Ad	bronchial
40	chr1:94681200-94689000	Genic enhancers	HUVEC	blood vessel
41	chr1:94681400-94681800	Genic enhancers	HMEC	breast
42	chr1:94681400-94682000	Enhancers	Liver	Liver
43	chr1:94681400-94682000	Genic enhancers	HSMM	muscle
44	chr1:94681400-94682000	Enhancers	NHLF	lung
45	chr1:94681400-94682200	Genic enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
46	chr1:94681600-94681800	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
47	chr1:94681600-94681800	Genic enhancers	NHEK	skin
48	chr1:94681600-94682000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
49	chr1:94681600-94682200	Genic enhancers	NH-A	brain

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