The 2.0 version of rSNPBase

Variant report

Variant rs7533977
Chromosome Location chr1:94700646-94700647
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94673800-94701000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:94685000-94701000 Weak transcription Right Ventricle heart
3 chr1:94685200-94700800 Weak transcription NHLF lung
4 chr1:94685200-94701000 Weak transcription Psoas Muscle Psoas
5 chr1:94696200-94701200 Enhancers Fetal Heart heart
6 chr1:94697000-94701400 Flanking Active TSS HUVEC blood vessel
7 chr1:94697400-94700800 Weak transcription HSMMtube muscle
8 chr1:94698200-94702800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:94698800-94700800 Enhancers HepG2 liver
10 chr1:94698800-94701000 Weak transcription Fetal Muscle Trunk muscle
11 chr1:94699000-94701200 Weak transcription Left Ventricle heart
12 chr1:94699200-94700800 Enhancers HSMM muscle
13 chr1:94699200-94703600 Active TSS Breast Myoepithelial Primary Cells Breast
14 chr1:94699400-94700800 Enhancers Adipose Nuclei Adipose
15 chr1:94699600-94701800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
16 chr1:94699600-94702200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr1:94699600-94703800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr1:94699800-94700800 Weak transcription Fetal Muscle Leg muscle
19 chr1:94699800-94702400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
20 chr1:94699800-94702600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:94699800-94703200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:94699800-94703400 Active TSS HMEC breast
23 chr1:94700200-94701000 Enhancers Pancreatic Islets Pancreatic Islet
24 chr1:94700200-94701400 Flanking Active TSS NH-A brain
25 chr1:94700200-94701600 Flanking Active TSS Liver Liver
26 chr1:94700200-94703600 Active TSS Skeletal Muscle Male skeletal muscle
27 chr1:94700400-94701400 Weak transcription Stomach Mucosa stomach
28 chr1:94700400-94702600 Bivalent/Poised TSS Fetal Kidney kidney
29 chr1:94700400-94703200 Active TSS Skeletal Muscle Female skeletal muscle
30 chr1:94700600-94700800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr1:94700600-94700800 Enhancers A549 lung
32 chr1:94700600-94700800 Active TSS NHEK skin
33 chr1:94700600-94700800 Active TSS Osteobl bone
34 chr1:94700600-94701000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:94700600-94701000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
36 chr1:94700600-94701000 Flanking Active TSS NHDF-Ad bronchial
37 chr1:94700600-94701200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:94700600-94701200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr1:94700600-94701400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:94700600-94702800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr1:94700600-94703400 Active TSS Muscle Satellite Cultured Cells --
42 chr1:94700600-94703800 Active TSS Right Atrium heart

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Last update: Aug 31, 2015