Variant report
Variant | rs67807923 |
---|---|
Chromosome Location | chr1:94822555-94822556 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1054626 | 0.86[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs11165103 | 0.94[EUR][1000 genomes] |
rs11165114 | 0.97[EUR][1000 genomes] |
rs12022859 | 0.89[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs12024941 | 0.81[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs12027548 | 0.89[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs12031606 | 0.84[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs12036085 | 0.86[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs12038745 | 0.84[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs12039546 | 0.84[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs12042509 | 0.98[EUR][1000 genomes] |
rs12046536 | 0.91[EUR][1000 genomes] |
rs12093742 | 0.91[EUR][1000 genomes] |
rs12562103 | 0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs12563826 | 0.86[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs1360365 | 0.94[EUR][1000 genomes] |
rs1576592 | 0.90[EUR][1000 genomes] |
rs1611832 | 0.95[EUR][1000 genomes] |
rs1622451 | 0.98[EUR][1000 genomes] |
rs1623248 | 0.98[EUR][1000 genomes] |
rs1623314 | 0.98[EUR][1000 genomes] |
rs1629275 | 0.92[EUR][1000 genomes] |
rs1687947 | 0.90[EUR][1000 genomes] |
rs1687950 | 0.91[EUR][1000 genomes] |
rs16928 | 0.97[EUR][1000 genomes] |
rs17111408 | 0.89[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs17111419 | 0.89[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs17111426 | 0.86[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs17111436 | 0.95[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs1765636 | 0.98[EUR][1000 genomes] |
rs1765640 | 0.93[EUR][1000 genomes] |
rs1929131 | 0.81[EUR][1000 genomes] |
rs1999270 | 0.90[EUR][1000 genomes] |
rs1999271 | 0.90[EUR][1000 genomes] |
rs2130899 | 0.89[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs2391472 | 0.94[EUR][1000 genomes] |
rs35275815 | 0.92[EUR][1000 genomes] |
rs3789690 | 0.82[EUR][1000 genomes] |
rs4543802 | 0.98[EUR][1000 genomes] |
rs4847201 | 0.90[EUR][1000 genomes] |
rs4847296 | 0.91[EUR][1000 genomes] |
rs55961421 | 0.91[EUR][1000 genomes] |
rs56037795 | 0.84[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs57666908 | 0.82[EUR][1000 genomes] |
rs6541343 | 0.90[EUR][1000 genomes] |
rs6541345 | 0.90[EUR][1000 genomes] |
rs6662877 | 0.89[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs6673491 | 0.91[EUR][1000 genomes] |
rs6675959 | 0.90[EUR][1000 genomes] |
rs6681827 | 0.90[EUR][1000 genomes] |
rs66918029 | 0.91[EUR][1000 genomes] |
rs66961454 | 0.89[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs67180557 | 0.89[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs67554381 | 0.84[AMR][1000 genomes];0.92[EUR][1000 genomes] |
rs67612304 | 0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs67681803 | 0.86[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs68193246 | 0.89[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs7413345 | 0.84[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs7415246 | 0.84[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs7515965 | 0.90[EUR][1000 genomes] |
rs7520754 | 0.91[EUR][1000 genomes] |
rs7525320 | 0.84[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs7533977 | 0.90[EUR][1000 genomes] |
rs7554714 | 0.90[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv428510 | chr1:94709575-94866655 | Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 13 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:94821200-94826000 | Enhancers | Liver | Liver |
2 | chr1:94821400-94824600 | Weak transcription | Fetal Thymus | thymus |
3 | chr1:94821800-94822800 | Weak transcription | HepG2 | liver |