Variant report

Variant	rs10756697
Chromosome Location	chr9:15728517-15728518
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 249 )
Associated
traits (count: 5 )

rSNPs within LD-proxies of this variant (count:242)

rs_ID	r²[population]
rs10283865	0.82[CEU][hapmap]
rs10481557	0.84[ASW][hapmap];0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.93[TSI][hapmap];0.82[EUR][1000 genomes]
rs10732335	0.84[AMR][1000 genomes]
rs10733295	0.85[CEU][hapmap]
rs10733301	0.95[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10733302	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10733305	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.83[AMR][1000 genomes]
rs10738402	0.80[EUR][1000 genomes]
rs10738403	0.88[EUR][1000 genomes]
rs10738404	0.95[EUR][1000 genomes]
rs10738405	0.95[EUR][1000 genomes]
rs10738406	0.95[EUR][1000 genomes]
rs10738411	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10738413	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10738417	0.96[CEU][hapmap];0.90[CHB][hapmap];0.83[AMR][1000 genomes]
rs10756671	0.89[CEU][hapmap]
rs10756674	0.96[CEU][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap]
rs10756677	0.96[CEU][hapmap];0.87[MEX][hapmap];0.86[TSI][hapmap];0.80[EUR][1000 genomes]
rs10756678	0.80[EUR][1000 genomes]
rs10756679	0.92[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap];0.85[EUR][1000 genomes]
rs10756680	0.83[EUR][1000 genomes]
rs10756686	0.92[CEU][hapmap]
rs10756687	0.96[CEU][hapmap];0.95[MEX][hapmap];0.91[TSI][hapmap];0.85[EUR][1000 genomes]
rs10756688	0.96[CEU][hapmap];0.87[MEX][hapmap];0.91[TSI][hapmap];0.84[EUR][1000 genomes]
rs10756689	0.96[CEU][hapmap];0.84[EUR][1000 genomes]
rs10756690	0.96[CEU][hapmap];0.90[EUR][1000 genomes]
rs10756692	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10756693	0.91[EUR][1000 genomes]
rs10756694	0.95[EUR][1000 genomes]
rs10756695	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10756696	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10756703	0.88[AMR][1000 genomes]
rs10756704	0.89[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];0.98[TSI][hapmap];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10756709	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs10756710	1.00[CHB][hapmap];0.91[JPT][hapmap]
rs10756711	1.00[CHB][hapmap];0.91[JPT][hapmap]
rs10756713	0.80[AMR][1000 genomes]
rs10756714	0.92[CEU][hapmap];0.90[CHB][hapmap];0.81[AMR][1000 genomes]
rs10756715	0.90[CHB][hapmap]
rs10756720	0.90[CHB][hapmap];0.95[MKK][hapmap];0.84[TSI][hapmap]
rs10810399	0.96[CEU][hapmap]
rs10810401	0.96[CEU][hapmap]
rs10810402	0.92[CEU][hapmap];0.93[TSI][hapmap]
rs10810408	0.96[CEU][hapmap];0.91[MEX][hapmap];0.88[TSI][hapmap]
rs10810409	0.84[EUR][1000 genomes]
rs10810416	0.85[CEU][hapmap]
rs10810419	0.85[CEU][hapmap]
rs10810426	0.85[CEU][hapmap]
rs10810427	0.85[CEU][hapmap]
rs10810428	0.96[CEU][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.90[EUR][1000 genomes]
rs10810429	0.85[CEU][hapmap]
rs10810431	0.95[EUR][1000 genomes]
rs10810432	0.95[EUR][1000 genomes]
rs10810433	0.95[EUR][1000 genomes]
rs10810434	0.95[EUR][1000 genomes]
rs10810435	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10810436	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10810438	0.89[CEU][hapmap];0.80[EUR][1000 genomes]
rs10810439	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.85[GIH][hapmap];0.86[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.84[MKK][hapmap];0.98[TSI][hapmap];1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10810440	0.81[CEU][hapmap]
rs10810442	0.93[CEU][hapmap];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10810446	1.00[CHB][hapmap];0.95[JPT][hapmap];0.84[ASN][1000 genomes]
rs10810450	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs10810451	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10810452	0.83[AMR][1000 genomes]
rs10810455	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.83[AMR][1000 genomes]
rs10810461	1.00[ASW][hapmap];0.89[CEU][hapmap];0.90[CHB][hapmap];0.93[GIH][hapmap];1.00[LWK][hapmap];0.95[MKK][hapmap];0.93[TSI][hapmap]
rs10810462	0.90[CHB][hapmap]
rs10962066	0.96[CEU][hapmap];0.91[MEX][hapmap];0.89[TSI][hapmap]
rs10962070	0.84[ASW][hapmap];0.96[CEU][hapmap];0.93[GIH][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];0.91[MKK][hapmap];0.93[TSI][hapmap]
rs10962098	0.96[CEU][hapmap];0.81[EUR][1000 genomes]
rs10962099	0.96[CEU][hapmap];0.81[EUR][1000 genomes]
rs10962110	0.92[CEU][hapmap];0.86[CHB][hapmap];0.81[JPT][hapmap];0.82[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs10962124	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10962125	0.80[EUR][1000 genomes]
rs10962126	0.85[CEU][hapmap];0.81[EUR][1000 genomes]
rs10962142	0.84[ASW][hapmap];0.85[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.85[GIH][hapmap];0.95[JPT][hapmap];0.91[MEX][hapmap];0.84[MKK][hapmap];0.87[TSI][hapmap];0.98[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10962149	0.89[CEU][hapmap];0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10962151	0.89[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10962156	1.00[CHB][hapmap];0.95[JPT][hapmap];0.85[ASN][1000 genomes]
rs10962157	0.89[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10962158	0.88[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.97[AMR][1000 genomes];0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10962162	0.80[AMR][1000 genomes]
rs10962163	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10962167	0.95[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11562188	0.84[AMR][1000 genomes]
rs11789538	0.89[EUR][1000 genomes]
rs11789563	0.95[EUR][1000 genomes]
rs11791627	0.93[EUR][1000 genomes]
rs11793900	0.82[EUR][1000 genomes]
rs12057012	0.99[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12340969	0.92[CEU][hapmap];0.83[EUR][1000 genomes]
rs12341679	0.81[CEU][hapmap];0.83[MEX][hapmap]
rs12346205	0.86[AMR][1000 genomes]
rs12349973	0.88[AMR][1000 genomes]
rs12377371	0.89[CEU][hapmap];0.80[EUR][1000 genomes]
rs12378499	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs12552653	0.96[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12553816	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes]
rs1328283	0.85[CHB][hapmap]
rs1328286	1.00[CHB][hapmap];0.81[JPT][hapmap]
rs13287834	0.85[CHB][hapmap];0.95[JPT][hapmap];0.84[ASN][1000 genomes]
rs13291638	0.86[EUR][1000 genomes]
rs13296276	0.86[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs13296360	1.00[CHB][hapmap];0.90[JPT][hapmap]
rs1341732	0.90[CHB][hapmap];0.83[JPT][hapmap]
rs1341737	1.00[CHB][hapmap];0.95[JPT][hapmap];0.83[MEX][hapmap]
rs1341738	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs1355171	0.85[CEU][hapmap];0.81[TSI][hapmap]
rs1396706	0.85[CEU][hapmap];0.81[EUR][1000 genomes]
rs1396707	0.92[CEU][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.95[EUR][1000 genomes]
rs1396708	1.00[ASW][hapmap];0.92[CEU][hapmap];0.95[CHB][hapmap];0.83[CHD][hapmap];0.98[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.83[MKK][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1509310	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1533040	0.96[CEU][hapmap];0.95[MEX][hapmap];0.91[TSI][hapmap];0.85[EUR][1000 genomes]
rs1539171	0.83[MEX][hapmap]
rs1539172	1.00[CHB][hapmap];0.92[CHD][hapmap];0.84[GIH][hapmap];0.95[JPT][hapmap];0.87[MEX][hapmap];0.83[TSI][hapmap];0.81[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs1539173	1.00[CHB][hapmap];0.95[JPT][hapmap];0.84[ASN][1000 genomes]
rs1553728	0.92[CEU][hapmap];0.87[EUR][1000 genomes]
rs1592099	1.00[CHB][hapmap];0.92[CHD][hapmap];0.85[GIH][hapmap];0.95[JPT][hapmap];0.91[MEX][hapmap];0.87[TSI][hapmap];0.95[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs169342	0.85[CEU][hapmap]
rs1812686	0.80[EUR][1000 genomes]
rs183928	0.85[CEU][hapmap]
rs1891211	0.82[CEU][hapmap]
rs1891212	0.82[CEU][hapmap];0.86[TSI][hapmap]
rs192466	0.81[CEU][hapmap]
rs1984246	0.86[TSI][hapmap]
rs2055772	0.96[CEU][hapmap];0.91[MEX][hapmap];0.88[TSI][hapmap]
rs2105315	1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs2105317	0.89[CEU][hapmap];0.85[JPT][hapmap];0.89[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2105318	0.97[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2105319	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2136355	0.95[EUR][1000 genomes]
rs2175080	0.81[CEU][hapmap];0.81[TSI][hapmap]
rs2175082	0.89[CEU][hapmap];0.95[MEX][hapmap];0.86[TSI][hapmap];0.81[EUR][1000 genomes]
rs2185663	1.00[CHB][hapmap];0.95[JPT][hapmap];0.81[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs2211323	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2225181	0.95[CHB][hapmap];0.81[JPT][hapmap]
rs2382532	0.87[EUR][1000 genomes]
rs2382534	0.92[CEU][hapmap];0.95[EUR][1000 genomes]
rs2382538	0.88[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs2382540	1.00[CHB][hapmap];0.95[JPT][hapmap];0.84[ASN][1000 genomes]
rs276435	0.84[CEU][hapmap]
rs276436	0.85[CEU][hapmap]
rs276448	0.85[CEU][hapmap]
rs276449	0.85[CEU][hapmap]
rs276453	0.85[CEU][hapmap]
rs276455	0.85[CEU][hapmap]
rs2891002	0.84[AMR][1000 genomes]
rs2891007	0.80[AMR][1000 genomes]
rs3119699	0.84[CEU][hapmap]
rs35146544	0.87[EUR][1000 genomes]
rs4146290	0.89[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4146291	1.00[ASW][hapmap];0.89[CEU][hapmap];1.00[CHB][hapmap];0.85[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];0.98[TSI][hapmap];0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4146293	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs432452	0.85[CEU][hapmap]
rs433849	0.84[CEU][hapmap]
rs4339736	0.90[EUR][1000 genomes]
rs442549	0.85[CEU][hapmap]
rs4448380	0.81[EUR][1000 genomes]
rs451878	0.85[CEU][hapmap]
rs4740614	0.81[CEU][hapmap]
rs4740615	0.96[CEU][hapmap];0.95[MEX][hapmap];0.89[TSI][hapmap]
rs4740619	0.96[CEU][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.83[EUR][1000 genomes]
rs4740620	0.85[EUR][1000 genomes]
rs4740622	0.82[EUR][1000 genomes]
rs4740624	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];0.85[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];0.98[TSI][hapmap];1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4740625	0.85[AMR][1000 genomes]
rs4740627	0.84[AMR][1000 genomes]
rs4740628	0.90[CHB][hapmap]
rs4741510	0.84[ASW][hapmap];0.82[CEU][hapmap];0.93[GIH][hapmap];1.00[LWK][hapmap];0.88[TSI][hapmap]
rs4741517	0.80[EUR][1000 genomes]
rs4741519	0.96[CEU][hapmap];0.84[EUR][1000 genomes]
rs4741528	0.96[CEU][hapmap];0.87[MEX][hapmap];0.91[TSI][hapmap];0.84[EUR][1000 genomes]
rs4741529	0.88[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs4741534	0.92[CEU][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.95[EUR][1000 genomes]
rs4741535	0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.98[TSI][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4741542	0.85[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4741545	1.00[ASW][hapmap];1.00[CHB][hapmap];0.87[CHD][hapmap];0.89[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];1.00[MKK][hapmap];0.85[TSI][hapmap];0.86[AMR][1000 genomes]
rs4741546	0.82[ASW][hapmap];1.00[CHB][hapmap];0.82[CHD][hapmap];0.91[JPT][hapmap];1.00[LWK][hapmap];0.95[MKK][hapmap]
rs4741548	0.86[CHB][hapmap]
rs4961713	0.85[AMR][1000 genomes]
rs6474931	0.96[CEU][hapmap]
rs6474942	0.87[EUR][1000 genomes]
rs6474944	0.96[CEU][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap];0.87[EUR][1000 genomes]
rs6474945	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs6474951	0.81[CEU][hapmap]
rs6474952	0.81[CEU][hapmap];0.81[TSI][hapmap]
rs6474953	0.95[EUR][1000 genomes]
rs6474954	0.92[CEU][hapmap];0.87[MEX][hapmap];0.95[TSI][hapmap];0.95[EUR][1000 genomes]
rs6474955	0.95[EUR][1000 genomes]
rs6474966	0.84[CEU][hapmap];0.81[AMR][1000 genomes]
rs6474967	0.84[ASW][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];0.95[JPT][hapmap];0.83[MEX][hapmap];0.86[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs6474974	0.89[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7019430	0.89[EUR][1000 genomes]
rs7019851	0.83[MEX][hapmap]
rs7023275	0.85[CEU][hapmap];0.83[MEX][hapmap]
rs7024640	0.92[CEU][hapmap];0.86[MEX][hapmap];0.95[TSI][hapmap];0.95[EUR][1000 genomes]
rs7025669	0.96[CEU][hapmap];0.84[EUR][1000 genomes]
rs7027202	0.82[CEU][hapmap];0.86[TSI][hapmap]
rs7032755	0.89[CEU][hapmap];0.91[MEX][hapmap];0.86[TSI][hapmap]
rs7033236	0.88[EUR][1000 genomes]
rs7034484	0.84[CEU][hapmap]
rs7034781	0.81[CEU][hapmap]
rs7035863	0.88[CEU][hapmap]
rs7036172	0.96[CEU][hapmap];0.85[EUR][1000 genomes]
rs7036674	0.95[CEU][hapmap];0.85[EUR][1000 genomes]
rs7043770	1.00[CHB][hapmap];0.95[JPT][hapmap];0.83[ASN][1000 genomes]
rs7045018	0.89[CEU][hapmap];0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7049176	0.89[EUR][1000 genomes]
rs735962	0.95[CHB][hapmap];0.81[JPT][hapmap]
rs7389047	0.81[EUR][1000 genomes]
rs7389629	0.96[CEU][hapmap];1.00[CHB][hapmap]
rs7466716	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7466717	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs7467156	0.81[CEU][hapmap]
rs7467207	0.81[CEU][hapmap]
rs770524	0.84[CEU][hapmap]
rs7846970	0.80[ASN][1000 genomes]
rs7847144	0.92[CEU][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.95[EUR][1000 genomes]
rs7849380	1.00[CHB][hapmap];0.95[JPT][hapmap]
rs7854714	0.90[EUR][1000 genomes]
rs7855235	0.95[EUR][1000 genomes]
rs7859780	0.96[CEU][hapmap];0.83[EUR][1000 genomes]
rs7860528	1.00[CHB][hapmap];0.95[JPT][hapmap];0.80[ASN][1000 genomes]
rs7860755	0.89[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7860869	0.89[CEU][hapmap];0.80[EUR][1000 genomes]
rs7860992	0.80[ASN][1000 genomes]
rs7861004	0.93[EUR][1000 genomes]
rs7861802	0.84[ASN][1000 genomes]
rs7863088	0.96[CEU][hapmap];0.87[MEX][hapmap];0.91[TSI][hapmap];0.83[EUR][1000 genomes]
rs7868779	0.87[EUR][1000 genomes]
rs7873152	0.85[CEU][hapmap]
rs7873776	0.89[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7874533	0.96[CEU][hapmap];0.87[MEX][hapmap];0.91[TSI][hapmap]
rs7875367	0.85[CEU][hapmap];0.83[MEX][hapmap]
rs9298740	0.81[CEU][hapmap]
rs9298741	0.81[CEU][hapmap]
rs950234	0.89[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs954663	0.85[CEU][hapmap]
rs955369	0.89[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.99[AMR][1000 genomes];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9650685	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs9886731	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv892625	chr9:15326251-16064850	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
2	nsv892627	chr9:15397969-15909450	Enhancers Flanking Active TSS Strong transcription Weak transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
3	esv2752286	chr9:15578017-15794897	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv892632	chr9:15590116-15869845	Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
5	nsv892633	chr9:15604746-15889411	Weak transcription Enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
6	nsv892634	chr9:15696501-15746168	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
7	esv32957	chr9:15720059-15737099	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

mRNA abundance (count:5)

SNP	Gene	Cis/trans	Tissue	Source
rs10756697	C9orf93	cis	cerebellum	SCAN
rs10756697	C9orf93	cis	parietal	SCAN
rs10756697	HTR2C	trans	brain	seeQTL
rs10756697	INPP4B	trans	brain	seeQTL
rs10756697	C9orf93	cis	brain	seeQTL

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:15679800-15746800	Weak transcription	Ovary	ovary
2	chr9:15687600-15746600	Weak transcription	Aorta	Aorta
3	chr9:15715200-15746200	Weak transcription	Left Ventricle	heart
4	chr9:15715600-15733800	Weak transcription	Brain Anterior Caudate	brain
5	chr9:15718000-15749600	Weak transcription	Stomach Smooth Muscle	stomach
6	chr9:15718600-15746600	Weak transcription	Thymus	Thymus
7	chr9:15720400-15733400	Weak transcription	Brain Cingulate Gyrus	brain
8	chr9:15720600-15735200	Weak transcription	Adipose Nuclei	Adipose
9	chr9:15723400-15728800	Weak transcription	Fetal Brain Male	brain
10	chr9:15725400-15734600	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr9:15726400-15731200	Weak transcription	Primary hematopoietic stem cells	blood
12	chr9:15727000-15729400	Weak transcription	Placenta	Placenta
13	chr9:15727400-15730200	Weak transcription	Esophagus	oesophagus
14	chr9:15727600-15732400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr9:15727800-15729000	Strong transcription	Fetal Thymus	thymus
16	chr9:15727800-15730200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr9:15727800-15731200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr9:15728000-15732000	Strong transcription	Breast Myoepithelial Primary Cells	Breast

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