The 2.0 version of rSNPBase

Variant report

Variant rs2151462
Chromosome Location chr20:24911823-24911824
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:24901400-24915200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr20:24908600-24912400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr20:24909400-24912000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr20:24909600-24913400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
5 chr20:24910400-24913200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr20:24910600-24912200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
7 chr20:24910600-24913000 Enhancers Fetal Thymus thymus
8 chr20:24910800-24912000 Active TSS Rectal Mucosa Donor 29 rectum
9 chr20:24910800-24912400 Enhancers Adipose Nuclei Adipose
10 chr20:24911000-24912000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr20:24911000-24912000 Active TSS Stomach Mucosa stomach
12 chr20:24911000-24912200 Enhancers H1 Cell Line embryonic stem cell
13 chr20:24911000-24912200 Enhancers HUES64 Cell Line embryonic stem cell
14 chr20:24911000-24913400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
15 chr20:24911000-24914600 Enhancers Primary T cells fromperipheralblood blood
16 chr20:24911000-24914600 Enhancers Primary hematopoietic stem cells short term culture blood
17 chr20:24911000-24914600 Enhancers Primary Natural Killer cells fromperipheralblood blood
18 chr20:24911000-24915200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr20:24911200-24912000 Active TSS Pancreas Pancrea
20 chr20:24911200-24912000 Active TSS Rectal Mucosa Donor 31 rectum
21 chr20:24911200-24912200 Enhancers H9 Cell Line embryonic stem cell
22 chr20:24911200-24912200 Active TSS Primary B cells from cord blood blood
23 chr20:24911200-24912200 Active TSS Gastric stomach
24 chr20:24911200-24913000 Enhancers HSMMtube muscle
25 chr20:24911200-24913600 Enhancers Primary T helper naive cells from peripheral blood blood
26 chr20:24911200-24914000 Weak transcription Fetal Intestine Small intestine
27 chr20:24911400-24912000 Enhancers Primary T killer memory cells from peripheral blood blood
28 chr20:24911400-24912200 Enhancers ES-I3 Cell Line embryonic stem cell
29 chr20:24911400-24913400 Enhancers Primary T killer naive cells fromperipheralblood blood
30 chr20:24911400-24913800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
31 chr20:24911400-24915800 Enhancers Thymus Thymus
32 chr20:24911600-24912000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr20:24911600-24912000 Enhancers Liver Liver
34 chr20:24911600-24912000 Weak transcription Esophagus oesophagus
35 chr20:24911600-24912400 Enhancers Breast Myoepithelial Primary Cells Breast
36 chr20:24911600-24912400 Enhancers Colonic Mucosa Colon
37 chr20:24911800-24912000 Enhancers Primary hematopoietic stem cells blood
38 chr20:24911800-24912600 Enhancers Duodenum Mucosa Duodenum
39 chr20:24911800-24913000 Enhancers HMEC breast
40 chr20:24911800-24913000 Enhancers NHEK skin
41 chr20:24911800-24913200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr20:24911800-24913400 Enhancers Primary T cells from cord blood blood
43 chr20:24911800-24913400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
44 chr20:24911800-24913400 Enhancers Primary T regulatory cells fromperipheralblood blood
45 chr20:24911800-24913800 Enhancers Primary T helper cells PMA-I stimulated --
46 chr20:24911800-24913800 Enhancers Primary T helper cells fromperipheralblood blood
47 chr20:24911800-24913800 Weak transcription Fetal Intestine Large intestine
48 chr20:24911800-24914200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
49 chr20:24911800-24914600 Enhancers Placenta Placenta

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Last update: Aug 31, 2015