The 2.0 version of rSNPBase

Variant report

Variant rs34419834
Chromosome Location chr20:24935617-24935618
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:24928600-24940400 Weak transcription Right Atrium heart
2 chr20:24929600-24936400 Weak transcription Fetal Intestine Small intestine
3 chr20:24930000-24936400 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr20:24930200-24936800 Enhancers Primary monocytes fromperipheralblood blood
5 chr20:24930200-24939400 Weak transcription Right Ventricle heart
6 chr20:24930400-24939000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr20:24930600-24943000 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr20:24930800-24938200 Weak transcription Colonic Mucosa Colon
9 chr20:24931000-24938000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr20:24931200-24936400 Weak transcription Esophagus oesophagus
11 chr20:24931200-24936400 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr20:24931400-24939600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr20:24931600-24938000 Weak transcription NHLF lung
14 chr20:24931600-24938600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr20:24931800-24936400 Weak transcription Muscle Satellite Cultured Cells --
16 chr20:24932000-24943000 Weak transcription HSMM muscle
17 chr20:24932000-24943400 Weak transcription HSMMtube muscle
18 chr20:24932200-24941000 Weak transcription A549 lung
19 chr20:24932400-24936000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr20:24932400-24936000 Enhancers Monocytes-CD14+_RO01746 blood
21 chr20:24932600-24938000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr20:24932600-24938200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr20:24932600-24939200 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr20:24933000-24936600 Weak transcription Brain Anterior Caudate brain
25 chr20:24933000-24937600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr20:24933200-24936400 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr20:24933200-24936400 Weak transcription Brain Germinal Matrix brain
28 chr20:24933200-24937000 Weak transcription Fetal Brain Female brain
29 chr20:24933200-24940400 Weak transcription Colon Smooth Muscle Colon
30 chr20:24933400-24936600 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr20:24933400-24938000 Weak transcription Left Ventricle heart
32 chr20:24933400-24938600 Weak transcription Aorta Aorta
33 chr20:24933600-24939000 Enhancers Primary T killer naive cells fromperipheralblood blood
34 chr20:24933800-24936600 Weak transcription Placenta Placenta
35 chr20:24933800-24936800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr20:24933800-24937400 Weak transcription HepG2 liver
37 chr20:24933800-24937400 Weak transcription HMEC breast
38 chr20:24933800-24941600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr20:24933800-24943800 Weak transcription NHEK skin
40 chr20:24934000-24936000 Enhancers Primary T helper cells fromperipheralblood blood
41 chr20:24934000-24936400 Weak transcription Brain Cingulate Gyrus brain
42 chr20:24934000-24936400 Weak transcription Fetal Muscle Trunk muscle
43 chr20:24934000-24937000 Enhancers Fetal Thymus thymus
44 chr20:24934000-24937200 Genic enhancers Primary hematopoietic stem cells short term culture blood
45 chr20:24934000-24937200 Weak transcription Duodenum Mucosa Duodenum
46 chr20:24934000-24937200 Weak transcription Stomach Smooth Muscle stomach
47 chr20:24934200-24935800 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr20:24934200-24936000 Enhancers Primary B cells from cord blood blood
49 chr20:24934200-24936200 Weak transcription Brain Angular Gyrus brain
50 chr20:24934200-24936400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015