Variant report

Variant rs6114980
Chromosome Location chr20:24974288-24974289
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:24972000-24974400 Active TSS Pancreatic Islets Pancreatic Islet
2 chr20:24972600-24974400 Active TSS Brain Angular Gyrus brain
3 chr20:24972800-24974400 Active TSS Sigmoid Colon Sigmoid Colon
4 chr20:24972800-24974600 Active TSS Fetal Brain Female brain
5 chr20:24973600-24974400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
6 chr20:24973600-24974400 Flanking Active TSS Primary B cells from cord blood blood
7 chr20:24973600-24974400 Flanking Active TSS Primary T cells from cord blood blood
8 chr20:24973600-24974400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
9 chr20:24973600-24974400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
10 chr20:24973600-24974400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr20:24973600-24974400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr20:24973600-24974400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr20:24973600-24974400 Flanking Active TSS Adipose Nuclei Adipose
14 chr20:24973600-24974400 Flanking Active TSS Liver Liver
15 chr20:24973600-24974400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
16 chr20:24973600-24974400 Flanking Active TSS Stomach Smooth Muscle stomach
17 chr20:24973600-24974600 Flanking Active TSS NHEK skin
18 chr20:24973800-24974400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr20:24973800-24974400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr20:24973800-24974400 Flanking Active TSS Muscle Satellite Cultured Cells --
21 chr20:24973800-24974400 Weak transcription Placenta Amnion Placenta Amnion
22 chr20:24973800-24974400 Flanking Active TSS Hela-S3 cervix
23 chr20:24973800-24974600 Weak transcription Spleen Spleen
24 chr20:24973800-24974600 Flanking Active TSS A549 lung
25 chr20:24973800-24974800 Flanking Active TSS HepG2 liver
26 chr20:24973800-24975200 Weak transcription Gastric stomach
27 chr20:24973800-24975400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr20:24973800-24975800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr20:24973800-24975800 Weak transcription Lung lung
30 chr20:24974000-24974400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
31 chr20:24974000-24974400 Enhancers Primary T killer memory cells from peripheral blood blood
32 chr20:24974000-24974400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
33 chr20:24974000-24974400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr20:24974000-24974400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
35 chr20:24974000-24974400 Flanking Active TSS Brain Cingulate Gyrus brain
36 chr20:24974000-24974400 Flanking Active TSS Brain Hippocampus Middle brain
37 chr20:24974000-24974400 Flanking Active TSS Fetal Brain Male brain
38 chr20:24974000-24974400 Enhancers Fetal Heart heart
39 chr20:24974000-24974400 Flanking Active TSS Fetal Lung lung
40 chr20:24974000-24974400 Flanking Active TSS NHDF-Ad bronchial
41 chr20:24974000-24974600 Weak transcription Esophagus oesophagus
42 chr20:24974000-24974600 Weak transcription Pancreas Pancrea
43 chr20:24974000-24974800 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
44 chr20:24974000-24974800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr20:24974000-24974800 Weak transcription Colonic Mucosa Colon
46 chr20:24974000-24974800 Enhancers Fetal Kidney kidney
47 chr20:24974000-24974800 Enhancers Fetal Stomach stomach
48 chr20:24974000-24974800 Enhancers HUVEC blood vessel
49 chr20:24974000-24975000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr20:24974000-24975000 Weak transcription Left Ventricle heart

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