Variant report
| Variant | rs56312312 |
|---|---|
| Chromosome Location | chr20:24959386-24959387 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr20:24935200-24971800 | Weak transcription | K562 | blood |
| 2 | chr20:24942000-24972400 | Weak transcription | Fetal Heart | heart |
| 3 | chr20:24942800-24961600 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 4 | chr20:24943200-24965000 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 5 | chr20:24944800-24960600 | Weak transcription | Stomach Mucosa | stomach |
| 6 | chr20:24950000-24966400 | Weak transcription | Small Intestine | intestine |
| 7 | chr20:24950800-24961000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 8 | chr20:24951600-24960400 | Genic enhancers | Primary neutrophils fromperipheralblood | blood |
| 9 | chr20:24952800-24961000 | Weak transcription | NHDF-Ad | bronchial |
| 10 | chr20:24953200-24962200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 11 | chr20:24953600-24960400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 12 | chr20:24953600-24960800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 13 | chr20:24953600-24972000 | Weak transcription | NH-A | brain |
| 14 | chr20:24954000-24960600 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 15 | chr20:24954000-24961000 | Weak transcription | Colon Smooth Muscle | Colon |
| 16 | chr20:24954200-24959800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 17 | chr20:24954200-24959800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 18 | chr20:24954200-24960000 | Weak transcription | Gastric | stomach |
| 19 | chr20:24954200-24960800 | Weak transcription | HMEC | breast |
| 20 | chr20:24954200-24960800 | Weak transcription | NHEK | skin |
| 21 | chr20:24954200-24961000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 22 | chr20:24954200-24961000 | Weak transcription | HSMMtube | muscle |
| 23 | chr20:24954200-24961800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 24 | chr20:24954200-24965800 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 25 | chr20:24954400-24960000 | Weak transcription | Pancreas | Pancrea |
| 26 | chr20:24954400-24961000 | Weak transcription | NHLF | lung |
| 27 | chr20:24954800-24960000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 28 | chr20:24954800-24961200 | Weak transcription | Right Ventricle | heart |
| 29 | chr20:24954800-24965800 | Weak transcription | Psoas Muscle | Psoas |
| 30 | chr20:24955400-24961200 | Weak transcription | Hela-S3 | cervix |
| 31 | chr20:24956400-24960600 | ZNF genes & repeats | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 32 | chr20:24956800-24962000 | Strong transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 33 | chr20:24957000-24960200 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 34 | chr20:24957000-24960200 | Strong transcription | Fetal Intestine Large | intestine |
| 35 | chr20:24957000-24960400 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 36 | chr20:24957000-24961200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 37 | chr20:24957000-24962800 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 38 | chr20:24957000-24963200 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 39 | chr20:24957000-24963600 | Strong transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 40 | chr20:24957000-24964200 | Strong transcription | Stomach Smooth Muscle | stomach |
| 41 | chr20:24957200-24960400 | Strong transcription | Placenta | Placenta |
| 42 | chr20:24957200-24961000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 43 | chr20:24957200-24961600 | Strong transcription | Aorta | Aorta |
| 44 | chr20:24957200-24962000 | Genic enhancers | Brain Hippocampus Middle | brain |
| 45 | chr20:24957200-24963800 | Strong transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 46 | chr20:24957200-24964600 | Strong transcription | Primary T helper naive cells fromperipheralblood | blood |
| 47 | chr20:24957400-24959400 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 48 | chr20:24957400-24959600 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 49 | chr20:24957400-24959800 | Strong transcription | Thymus | Thymus |
| 50 | chr20:24957400-24961200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
