The 2.0 version of rSNPBase

Variant report

Variant rs62215115
Chromosome Location chr20:24957455-24957456
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:24935200-24957600 Strong transcription Liver Liver
2 chr20:24935200-24971800 Weak transcription K562 blood
3 chr20:24942000-24972400 Weak transcription Fetal Heart heart
4 chr20:24942800-24961600 Strong transcription Primary T helper cells fromperipheralblood blood
5 chr20:24943200-24965000 Strong transcription Primary T helper cells PMA-I stimulated --
6 chr20:24944400-24958200 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr20:24944800-24960600 Weak transcription Stomach Mucosa stomach
8 chr20:24950000-24966400 Weak transcription Small Intestine intestine
9 chr20:24950800-24961000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr20:24951600-24960400 Genic enhancers Primary neutrophils fromperipheralblood blood
11 chr20:24952800-24961000 Weak transcription NHDF-Ad bronchial
12 chr20:24953200-24962200 Weak transcription Placenta Amnion Placenta Amnion
13 chr20:24953600-24958000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
14 chr20:24953600-24960400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr20:24953600-24960800 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr20:24953600-24972000 Weak transcription NH-A brain
17 chr20:24953800-24957600 Weak transcription Fetal Brain Male brain
18 chr20:24954000-24960600 Strong transcription Monocytes-CD14+_RO01746 blood
19 chr20:24954000-24961000 Weak transcription Colon Smooth Muscle Colon
20 chr20:24954200-24958000 Weak transcription Colonic Mucosa Colon
21 chr20:24954200-24958400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr20:24954200-24958600 Weak transcription Muscle Satellite Cultured Cells --
23 chr20:24954200-24958800 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr20:24954200-24959800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr20:24954200-24959800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr20:24954200-24960000 Weak transcription Gastric stomach
27 chr20:24954200-24960800 Weak transcription HMEC breast
28 chr20:24954200-24960800 Weak transcription NHEK skin
29 chr20:24954200-24961000 Weak transcription Rectal Smooth Muscle rectum
30 chr20:24954200-24961000 Weak transcription HSMMtube muscle
31 chr20:24954200-24961800 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr20:24954200-24965800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr20:24954400-24957800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr20:24954400-24957800 Weak transcription Fetal Stomach stomach
35 chr20:24954400-24958000 Weak transcription Fetal Intestine Small intestine
36 chr20:24954400-24960000 Weak transcription Pancreas Pancrea
37 chr20:24954400-24961000 Weak transcription NHLF lung
38 chr20:24954600-24957600 Weak transcription Left Ventricle heart
39 chr20:24954600-24958000 Weak transcription Esophagus oesophagus
40 chr20:24954800-24957800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr20:24954800-24958000 Weak transcription Brain Angular Gyrus brain
42 chr20:24954800-24960000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr20:24954800-24961200 Weak transcription Right Ventricle heart
44 chr20:24954800-24965800 Weak transcription Psoas Muscle Psoas
45 chr20:24955000-24958000 Weak transcription Lung lung
46 chr20:24955000-24958200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr20:24955400-24958200 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr20:24955400-24961200 Weak transcription Hela-S3 cervix
49 chr20:24955600-24957800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr20:24955800-24958000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015