The 2.0 version of rSNPBase

Variant report

Variant rs2424691
Chromosome Location chr20:24912729-24912730
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:24901400-24915200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr20:24909600-24913400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
3 chr20:24910400-24913200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr20:24910600-24913000 Enhancers Fetal Thymus thymus
5 chr20:24911000-24913400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
6 chr20:24911000-24914600 Enhancers Primary T cells fromperipheralblood blood
7 chr20:24911000-24914600 Enhancers Primary hematopoietic stem cells short term culture blood
8 chr20:24911000-24914600 Enhancers Primary Natural Killer cells fromperipheralblood blood
9 chr20:24911000-24915200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr20:24911200-24913000 Enhancers HSMMtube muscle
11 chr20:24911200-24913600 Enhancers Primary T helper naive cells from peripheral blood blood
12 chr20:24911200-24914000 Weak transcription Fetal Intestine Small intestine
13 chr20:24911400-24913400 Enhancers Primary T killer naive cells fromperipheralblood blood
14 chr20:24911400-24913800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
15 chr20:24911400-24915800 Enhancers Thymus Thymus
16 chr20:24911800-24913000 Enhancers HMEC breast
17 chr20:24911800-24913000 Enhancers NHEK skin
18 chr20:24911800-24913200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr20:24911800-24913400 Enhancers Primary T cells from cord blood blood
20 chr20:24911800-24913400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
21 chr20:24911800-24913400 Enhancers Primary T regulatory cells fromperipheralblood blood
22 chr20:24911800-24913800 Enhancers Primary T helper cells PMA-I stimulated --
23 chr20:24911800-24913800 Enhancers Primary T helper cells fromperipheralblood blood
24 chr20:24911800-24913800 Weak transcription Fetal Intestine Large intestine
25 chr20:24911800-24914200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
26 chr20:24911800-24914600 Enhancers Placenta Placenta
27 chr20:24912000-24913000 Enhancers Primary monocytes fromperipheralblood blood
28 chr20:24912000-24913000 Enhancers Primary T helper naive cells fromperipheralblood blood
29 chr20:24912000-24913200 Enhancers Muscle Satellite Cultured Cells --
30 chr20:24912000-24913200 Enhancers HSMM muscle
31 chr20:24912000-24913400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr20:24912000-24913400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr20:24912000-24914200 Enhancers Primary T helper 17 cells PMA-I stimulated --
34 chr20:24912000-24914600 Enhancers Dnd41 blood
35 chr20:24912200-24913400 Enhancers Stomach Mucosa stomach
36 chr20:24912200-24914000 Weak transcription Gastric stomach
37 chr20:24912200-24914400 Enhancers Primary hematopoietic stem cells blood
38 chr20:24912200-24915000 Weak transcription Esophagus oesophagus
39 chr20:24912400-24913600 Weak transcription Colonic Mucosa Colon
40 chr20:24912400-24913800 Enhancers Primary T killer memory cells from peripheral blood blood
41 chr20:24912600-24913200 Weak transcription Pancreas Pancrea
42 chr20:24912600-24913600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr20:24912600-24914000 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015