Variant report

Variant rs13041643
Chromosome Location chr20:24938195-24938196
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:24928600-24940400 Weak transcription Right Atrium heart
2 chr20:24930200-24939400 Weak transcription Right Ventricle heart
3 chr20:24930400-24939000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr20:24930600-24943000 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr20:24930800-24938200 Weak transcription Colonic Mucosa Colon
6 chr20:24931400-24939600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr20:24931600-24938600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr20:24932000-24943000 Weak transcription HSMM muscle
9 chr20:24932000-24943400 Weak transcription HSMMtube muscle
10 chr20:24932200-24941000 Weak transcription A549 lung
11 chr20:24932600-24938200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr20:24932600-24939200 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr20:24933200-24940400 Weak transcription Colon Smooth Muscle Colon
14 chr20:24933400-24938600 Weak transcription Aorta Aorta
15 chr20:24933600-24939000 Enhancers Primary T killer naive cells fromperipheralblood blood
16 chr20:24933800-24941600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr20:24933800-24943800 Weak transcription NHEK skin
18 chr20:24934400-24938400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr20:24934600-24943200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr20:24935000-24938200 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr20:24935000-24939000 Genic enhancers Primary neutrophils fromperipheralblood blood
22 chr20:24935000-24943000 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr20:24935000-24943800 Weak transcription Rectal Smooth Muscle rectum
24 chr20:24935000-24953600 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
25 chr20:24935200-24943200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr20:24935200-24957600 Strong transcription Liver Liver
27 chr20:24935200-24971800 Weak transcription K562 blood
28 chr20:24935400-24940200 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr20:24935400-24943000 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr20:24935600-24940200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr20:24935800-24939400 Weak transcription H1 Cell Line embryonic stem cell
32 chr20:24935800-24941200 Weak transcription Small Intestine intestine
33 chr20:24935800-24942600 Weak transcription Osteobl bone
34 chr20:24935800-24945200 Strong transcription Skeletal Muscle Male skeletal muscle
35 chr20:24936000-24939800 Weak transcription Primary B cells from cord blood blood
36 chr20:24936000-24941000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr20:24936000-24942000 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr20:24936000-24955600 Strong transcription Primary T regulatory cells fromperipheralblood blood
39 chr20:24936200-24939000 Genic enhancers Primary T killer memory cells from peripheral blood blood
40 chr20:24936200-24939800 Weak transcription Primary B cells from peripheral blood blood
41 chr20:24936200-24940600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
42 chr20:24936200-24941400 Strong transcription Brain Angular Gyrus brain
43 chr20:24936200-24947400 Genic enhancers Primary T cells fromperipheralblood blood
44 chr20:24936200-24954400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr20:24936400-24940000 Strong transcription Brain Cingulate Gyrus brain
46 chr20:24936400-24941600 Strong transcription Esophagus oesophagus
47 chr20:24936400-24943000 Strong transcription Fetal Muscle Trunk muscle
48 chr20:24936400-24947000 Strong transcription Sigmoid Colon Sigmoid Colon
49 chr20:24936400-24954400 Strong transcription Fetal Intestine Small intestine
50 chr20:24936400-24954400 Strong transcription Fetal Stomach stomach

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