The 2.0 version of rSNPBase

Variant report

Variant rs58146508
Chromosome Location chr9:100399683-100399684
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100396800-100400600 Weak transcription Gastric stomach
2 chr9:100396800-100410200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr9:100397000-100403000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
4 chr9:100397000-100405800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr9:100397000-100409200 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr9:100397000-100410200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr9:100397000-100410200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr9:100397000-100411000 Weak transcription Esophagus oesophagus
9 chr9:100397200-100400000 Enhancers Primary T regulatory cells fromperipheralblood blood
10 chr9:100397200-100400200 Enhancers Primary T killer naive cells fromperipheralblood blood
11 chr9:100397200-100405600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr9:100397400-100400000 Enhancers Adipose Nuclei Adipose
13 chr9:100397400-100401600 Enhancers Primary T helper 17 cells PMA-I stimulated --
14 chr9:100397400-100401800 Enhancers Primary T killer memory cells from peripheral blood blood
15 chr9:100397400-100402000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
16 chr9:100397400-100403000 Enhancers Primary T helper naive cells from peripheral blood blood
17 chr9:100397600-100399800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr9:100397600-100399800 Enhancers Skeletal Muscle Male skeletal muscle
19 chr9:100397600-100400000 Enhancers NHDF-Ad bronchial
20 chr9:100397600-100400800 Enhancers Primary T cells from cord blood blood
21 chr9:100397600-100401200 Enhancers Breast Myoepithelial Primary Cells Breast
22 chr9:100397600-100401600 Enhancers Liver Liver
23 chr9:100397600-100402000 Enhancers Primary T helper naive cells fromperipheralblood blood
24 chr9:100397600-100403000 Weak transcription Placenta Placenta
25 chr9:100397600-100403800 Weak transcription H1 Cell Line embryonic stem cell
26 chr9:100397600-100405000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr9:100397600-100405400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr9:100397600-100405400 Weak transcription Fetal Kidney kidney
29 chr9:100397600-100409800 Weak transcription Colonic Mucosa Colon
30 chr9:100397800-100399800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
31 chr9:100397800-100401000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr9:100397800-100405800 Weak transcription H9 Cell Line embryonic stem cell
33 chr9:100398000-100399800 Enhancers Primary mononuclear cells fromperipheralblood Blood
34 chr9:100398000-100400600 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr9:100398000-100403200 Weak transcription Fetal Muscle Trunk muscle
36 chr9:100398000-100410200 Weak transcription Lung lung
37 chr9:100398000-100418600 Weak transcription Pancreas Pancrea
38 chr9:100398400-100400000 Enhancers Primary hematopoietic stem cells short term culture blood
39 chr9:100398400-100400000 Enhancers Brain Hippocampus Middle brain
40 chr9:100398400-100400600 Weak transcription Stomach Smooth Muscle stomach
41 chr9:100398400-100400600 Genic enhancers HSMM muscle
42 chr9:100398400-100401800 Enhancers A549 lung
43 chr9:100398400-100402400 Enhancers Primary T helper cells fromperipheralblood blood
44 chr9:100398400-100402600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr9:100398400-100402600 Weak transcription Primary B cells from peripheral blood blood
46 chr9:100398400-100402600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
47 chr9:100398400-100402600 Weak transcription Fetal Muscle Leg muscle
48 chr9:100398400-100402800 Weak transcription Fetal Thymus thymus
49 chr9:100398400-100402800 Enhancers HepG2 liver
50 chr9:100398400-100403000 Weak transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015