The 2.0 version of rSNPBase

Variant report

Variant rs3176665
Chromosome Location chr9:100452820-100452821
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100401200-100456000 Strong transcription Primary T regulatory cells fromperipheralblood blood
2 chr9:100402400-100455600 Strong transcription Dnd41 blood
3 chr9:100402600-100456000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
4 chr9:100402600-100456200 Strong transcription Primary B cells from peripheral blood blood
5 chr9:100402800-100454200 Strong transcription Fetal Thymus thymus
6 chr9:100402800-100456000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr9:100403000-100454400 Strong transcription Placenta Placenta
8 chr9:100403000-100454600 Strong transcription Breast Myoepithelial Primary Cells Breast
9 chr9:100403200-100454400 Strong transcription Rectal Mucosa Donor 31 rectum
10 chr9:100403200-100455000 Strong transcription Primary T cells fromperipheralblood blood
11 chr9:100403600-100453800 Strong transcription Rectal Mucosa Donor 29 rectum
12 chr9:100404800-100455400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr9:100410200-100454000 Strong transcription Fetal Muscle Trunk muscle
14 chr9:100412600-100454200 Strong transcription Duodenum Smooth Muscle Duodenum
15 chr9:100423000-100456000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr9:100426400-100453600 Strong transcription Primary B cells from cord blood blood
17 chr9:100429200-100455000 Strong transcription Primary T helper cells PMA-I stimulated --
18 chr9:100429200-100455600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr9:100429600-100454000 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr9:100429600-100455400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr9:100429600-100455800 Strong transcription Primary monocytes fromperipheralblood blood
22 chr9:100429800-100456000 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr9:100434400-100455600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr9:100436600-100454600 Strong transcription Adipose Nuclei Adipose
25 chr9:100437400-100456000 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr9:100437600-100455800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr9:100437600-100458400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr9:100438000-100458400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr9:100438400-100457200 Weak transcription Psoas Muscle Psoas
30 chr9:100438400-100457400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr9:100438600-100457800 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr9:100439000-100458800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr9:100439800-100454400 Strong transcription Fetal Adrenal Gland Adrenal Gland
34 chr9:100440000-100454400 Strong transcription Fetal Muscle Leg muscle
35 chr9:100442000-100454000 Strong transcription Primary neutrophils fromperipheralblood blood
36 chr9:100442000-100454000 Strong transcription Colon Smooth Muscle Colon
37 chr9:100442000-100455200 Strong transcription Primary T helper cells fromperipheralblood blood
38 chr9:100442200-100454000 Strong transcription Sigmoid Colon Sigmoid Colon
39 chr9:100442200-100454200 Strong transcription Brain Germinal Matrix brain
40 chr9:100445000-100455000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr9:100445400-100453800 Strong transcription Brain Inferior Temporal Lobe brain
42 chr9:100446000-100453800 Strong transcription HepG2 liver
43 chr9:100446200-100453800 Strong transcription Rectal Smooth Muscle rectum
44 chr9:100446400-100454400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
45 chr9:100446800-100456800 Weak transcription Small Intestine intestine
46 chr9:100446800-100457600 Weak transcription HUES48 Cell Line embryonic stem cell
47 chr9:100446800-100457800 Weak transcription Aorta Aorta
48 chr9:100447000-100453200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr9:100447000-100453600 Weak transcription Right Ventricle heart
50 chr9:100447000-100457800 Weak transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015