The 2.0 version of rSNPBase

Variant report

Variant rs3176645
Chromosome Location chr9:100457060-100457061
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100437600-100458400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr9:100438000-100458400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr9:100438400-100457200 Weak transcription Psoas Muscle Psoas
4 chr9:100438400-100457400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr9:100438600-100457800 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr9:100439000-100458800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr9:100446800-100457600 Weak transcription HUES48 Cell Line embryonic stem cell
8 chr9:100446800-100457800 Weak transcription Aorta Aorta
9 chr9:100447000-100457800 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr9:100447200-100457200 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr9:100447200-100457400 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr9:100447200-100458400 Weak transcription Colonic Mucosa Colon
13 chr9:100451200-100458400 Weak transcription Esophagus oesophagus
14 chr9:100451600-100458000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr9:100452000-100457800 Weak transcription Stomach Mucosa stomach
16 chr9:100452400-100457200 Weak transcription Muscle Satellite Cultured Cells --
17 chr9:100452400-100457200 Weak transcription HSMM muscle
18 chr9:100452600-100457800 Weak transcription Pancreas Pancrea
19 chr9:100453600-100457200 Weak transcription Primary B cells from cord blood blood
20 chr9:100453800-100457200 Weak transcription Fetal Kidney kidney
21 chr9:100453800-100457200 Weak transcription Ovary ovary
22 chr9:100453800-100457200 Weak transcription Rectal Smooth Muscle rectum
23 chr9:100453800-100457800 Weak transcription Placenta Amnion Placenta Amnion
24 chr9:100453800-100457800 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr9:100453800-100457800 Weak transcription NH-A brain
26 chr9:100453800-100458400 Weak transcription Left Ventricle heart
27 chr9:100454000-100457200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr9:100454000-100457200 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr9:100454000-100457400 Weak transcription Gastric stomach
30 chr9:100454000-100457600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr9:100454000-100457800 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr9:100454000-100457800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr9:100454000-100458200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr9:100454000-100458200 Weak transcription Fetal Muscle Trunk muscle
35 chr9:100454000-100458400 Weak transcription Primary neutrophils fromperipheralblood blood
36 chr9:100454000-100458400 Weak transcription Thymus Thymus
37 chr9:100454200-100457200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr9:100454200-100457800 Weak transcription Fetal Thymus thymus
39 chr9:100454400-100457200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr9:100454400-100457200 Weak transcription Brain Anterior Caudate brain
41 chr9:100454400-100457200 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr9:100454400-100457800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr9:100454400-100457800 Weak transcription Fetal Muscle Leg muscle
44 chr9:100454400-100458200 Weak transcription Placenta Placenta
45 chr9:100454400-100458800 Weak transcription Lung lung
46 chr9:100454400-100459000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr9:100454600-100457400 Weak transcription Fetal Stomach stomach
48 chr9:100454600-100457800 Weak transcription Spleen Spleen
49 chr9:100455000-100457800 Weak transcription Primary T cells fromperipheralblood blood
50 chr9:100455200-100457600 Enhancers Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015