The 2.0 version of rSNPBase

Variant report

Variant rs3176739
Chromosome Location chr9:100439683-100439684
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100400800-100451600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr9:100401200-100456000 Strong transcription Primary T regulatory cells fromperipheralblood blood
3 chr9:100402400-100451400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr9:100402400-100455600 Strong transcription Dnd41 blood
5 chr9:100402600-100456000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
6 chr9:100402600-100456200 Strong transcription Primary B cells from peripheral blood blood
7 chr9:100402800-100454200 Strong transcription Fetal Thymus thymus
8 chr9:100402800-100456000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr9:100403000-100439800 Strong transcription HUES6 Cell Line embryonic stem cell
10 chr9:100403000-100449400 Strong transcription HSMM muscle
11 chr9:100403000-100450400 Strong transcription Duodenum Mucosa Duodenum
12 chr9:100403000-100454400 Strong transcription Placenta Placenta
13 chr9:100403000-100454600 Strong transcription Breast Myoepithelial Primary Cells Breast
14 chr9:100403200-100454400 Strong transcription Rectal Mucosa Donor 31 rectum
15 chr9:100403200-100455000 Strong transcription Primary T cells fromperipheralblood blood
16 chr9:100403400-100444200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr9:100403600-100453800 Strong transcription Rectal Mucosa Donor 29 rectum
18 chr9:100404000-100449200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr9:100404800-100455400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr9:100409400-100439800 Strong transcription HMEC breast
21 chr9:100409600-100440000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr9:100410200-100454000 Strong transcription Fetal Muscle Trunk muscle
23 chr9:100411200-100451000 Strong transcription Liver Liver
24 chr9:100412600-100454200 Strong transcription Duodenum Smooth Muscle Duodenum
25 chr9:100413000-100451800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr9:100414400-100448400 Strong transcription HUVEC blood vessel
27 chr9:100416400-100440200 Strong transcription Primary hematopoietic stem cells blood
28 chr9:100416400-100448200 Strong transcription NHDF-Ad bronchial
29 chr9:100416400-100451200 Strong transcription Hela-S3 cervix
30 chr9:100423000-100456000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr9:100423400-100451400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr9:100426200-100444200 Strong transcription Cortex derived primary cultured neurospheres brain
33 chr9:100426400-100442800 Strong transcription Muscle Satellite Cultured Cells --
34 chr9:100426400-100443800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr9:100426400-100453600 Strong transcription Primary B cells from cord blood blood
36 chr9:100427800-100450800 Weak transcription Stomach Mucosa stomach
37 chr9:100428600-100441200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
38 chr9:100429200-100455000 Strong transcription Primary T helper cells PMA-I stimulated --
39 chr9:100429200-100455600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr9:100429400-100441600 Strong transcription Primary T helper cells fromperipheralblood blood
41 chr9:100429600-100447000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
42 chr9:100429600-100454000 Strong transcription Primary hematopoietic stem cells short term culture blood
43 chr9:100429600-100455400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr9:100429600-100455800 Strong transcription Primary monocytes fromperipheralblood blood
45 chr9:100429800-100456000 Strong transcription Monocytes-CD14+_RO01746 blood
46 chr9:100431200-100446200 Weak transcription Gastric stomach
47 chr9:100432800-100440800 Weak transcription Spleen Spleen
48 chr9:100433600-100449600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr9:100434400-100455600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr9:100436200-100448200 Strong transcription A549 lung

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Last update: Aug 31, 2015