Variant report

Variant	rs7866961
Chromosome Location	chr9:100414616-100414617
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr9:100412559..100415235-chr9:100423498..100425569,2	MCF-7	breast:
2	chr9:100399646..100402826-chr9:100413871..100416046,3	MCF-7	breast:
3	chr9:100413361..100415528-chr9:100417013..100418852,2	K562	blood:
4	chr9:100413373..100415066-chr9:100422834..100425671,2	K562	blood:
5	chr9:100413415..100415799-chr9:100435850..100438794,3	K562	blood:
6	chr9:100410274..100416448-chr9:100436904..100442072,6	K562	blood:
7	chr9:100412483..100414670-chr9:100416254..100417755,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000136936	Chromatin interaction

Extended variants
information (count: 198 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:195)

rs_ID	r²[population]
rs1034098	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1034099	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs1034100	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs10512254	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1116208	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1126122	1.00[ASN][1000 genomes]
rs12345701	0.90[ASN][1000 genomes]
rs12349801	0.85[ASN][1000 genomes]
rs14066	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1411344	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1543636	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16922319	0.95[ASN][1000 genomes]
rs16923033	0.83[YRI][hapmap];0.86[AFR][1000 genomes]
rs16923041	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16923112	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs16923269	1.00[JPT][hapmap];0.87[YRI][hapmap];0.84[ASN][1000 genomes]
rs1813875	0.86[AFR][1000 genomes]
rs1928641	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1928642	0.86[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2282066	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2282067	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2297155	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs2297156	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs2297157	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs2297158	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs2297159	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs2297160	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs2297161	0.82[ASN][1000 genomes]
rs2401635	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs2668794	0.82[JPT][hapmap]
rs2668795	0.82[JPT][hapmap]
rs2668797	0.82[JPT][hapmap]
rs2805783	0.82[JPT][hapmap]
rs2808681	0.82[JPT][hapmap]
rs28403588	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs28403589	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs3176623	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176624	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176626	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176628	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176629	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176634	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs3176635	0.80[YRI][hapmap];0.81[AFR][1000 genomes]
rs3176637	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176638	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176642	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs3176644	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176645	0.87[ASN][1000 genomes]
rs3176651	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176654	0.87[ASN][1000 genomes]
rs3176659	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176665	0.87[ASN][1000 genomes]
rs3176668	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176669	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176670	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176673	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs3176675	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176682	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176685	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176687	0.80[YRI][hapmap];0.81[AFR][1000 genomes]
rs3176688	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176694	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176698	0.87[ASN][1000 genomes]
rs3176700	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs3176703	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs3176706	0.80[YRI][hapmap];0.81[AFR][1000 genomes]
rs3176708	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176711	0.80[YRI][hapmap];0.81[AFR][1000 genomes]
rs3176712	0.80[YRI][hapmap];0.81[AFR][1000 genomes]
rs3176714	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176720	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176721	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs3176723	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176724	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176726	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176728	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs3176734	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs3176735	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176736	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176739	0.87[ASN][1000 genomes]
rs3176740	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176744	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176746	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176747	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176751	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.84[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176752	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs3176758	0.87[ASN][1000 genomes]
rs3176759	0.87[ASN][1000 genomes]
rs3750368	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs3750369	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs3750370	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3763606	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs3802472	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3802473	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3802474	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs3824494	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs3897841	0.95[ASN][1000 genomes]
rs41274252	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs55966848	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs56052819	0.94[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs56060429	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs56164437	0.95[ASN][1000 genomes]
rs56200116	0.94[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs57188235	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs57598118	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs57940370	0.87[ASN][1000 genomes]
rs58146508	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs58387091	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs58390229	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs58637778	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs58878935	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs58933803	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs59205756	0.87[ASN][1000 genomes]
rs59354722	0.94[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs59478543	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs59662386	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs59775587	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs59791764	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs59992945	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs60026475	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs60028882	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs60055057	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs60104153	0.88[AMR][1000 genomes]
rs60359353	1.00[ASN][1000 genomes]
rs60463150	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs60596698	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs60653177	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs60821994	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs60822454	0.80[ASN][1000 genomes]
rs61152667	0.97[ASN][1000 genomes]
rs61208411	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs61221847	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61276200	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61440789	0.94[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs61445476	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61739366	0.83[AFR][1000 genomes]
rs6478304	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs6478305	0.80[YRI][hapmap];0.81[AFR][1000 genomes]
rs7018546	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7021377	0.81[AFR][1000 genomes]
rs7025403	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7036604	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7045160	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs7049183	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7341850	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73498323	0.85[AFR][1000 genomes]
rs73498324	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73498329	0.86[AFR][1000 genomes]
rs73498332	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73498338	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73498347	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73498348	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73498355	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73498358	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73498359	0.86[AFR][1000 genomes]
rs73498362	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73498365	0.81[AFR][1000 genomes]
rs73498377	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73498380	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73498381	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73498394	0.87[ASN][1000 genomes]
rs73500307	0.81[AFR][1000 genomes]
rs73500321	0.81[AFR][1000 genomes]
rs73500325	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73500326	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73500328	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73500393	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73500395	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73500396	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73500397	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73500398	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73500400	0.95[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73502204	0.87[ASN][1000 genomes]
rs73551090	0.83[AFR][1000 genomes]
rs73552509	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs73552512	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs73552520	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs73554629	0.97[ASN][1000 genomes]
rs73554631	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs73554641	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs73554646	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs73554650	0.82[AFR][1000 genomes]
rs73554652	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7850986	0.95[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs7853179	0.96[YRI][hapmap];0.84[AFR][1000 genomes]
rs7856316	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7857174	0.82[AFR][1000 genomes]
rs7859684	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7859979	0.82[AFR][1000 genomes]
rs7862356	0.94[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs7867046	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7869683	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs953198	0.82[JPT][hapmap]
rs9539	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs9777684	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039240	chr9:100292680-100415269	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
2	nsv540179	chr9:100292680-100415269	Genic enhancers Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
3	nsv893610	chr9:100324086-100496160	Active TSS Strong transcription Enhancers ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:100398000-100418600	Weak transcription	Pancreas	Pancrea
2	chr9:100399200-100421400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr9:100399400-100415600	Weak transcription	Small Intestine	intestine
4	chr9:100399600-100426800	Weak transcription	Stomach Mucosa	stomach
5	chr9:100400800-100451600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr9:100401200-100429000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
7	chr9:100401200-100456000	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
8	chr9:100402400-100422400	Strong transcription	Monocytes-CD14+_RO01746	blood
9	chr9:100402400-100425000	Strong transcription	Primary B cells from cord blood	blood
10	chr9:100402400-100439600	Strong transcription	HUES64 Cell Line	embryonic stem cell
11	chr9:100402400-100451400	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr9:100402400-100455600	Strong transcription	Dnd41	blood
13	chr9:100402600-100456000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
14	chr9:100402600-100456200	Strong transcription	Primary B cells from peripheral blood	blood
15	chr9:100402800-100415200	Strong transcription	Primary T helper memory cells from peripheral blood 1	blood
16	chr9:100402800-100429000	Strong transcription	Primary T helper cells fromperipheralblood	blood
17	chr9:100402800-100454200	Strong transcription	Fetal Thymus	thymus
18	chr9:100402800-100456000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr9:100403000-100422600	Strong transcription	Primary monocytes fromperipheralblood	blood
20	chr9:100403000-100428400	Strong transcription	Primary T helper cells PMA-I stimulated	--
21	chr9:100403000-100439400	Strong transcription	HUES48 Cell Line	embryonic stem cell
22	chr9:100403000-100439800	Strong transcription	HUES6 Cell Line	embryonic stem cell
23	chr9:100403000-100449400	Strong transcription	HSMM	muscle
24	chr9:100403000-100450400	Strong transcription	Duodenum Mucosa	Duodenum
25	chr9:100403000-100454400	Strong transcription	Placenta	Placenta
26	chr9:100403000-100454600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
27	chr9:100403200-100454400	Strong transcription	Rectal Mucosa Donor 31	rectum
28	chr9:100403200-100455000	Strong transcription	Primary T cells fromperipheralblood	blood
29	chr9:100403400-100434400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr9:100403400-100439600	Strong transcription	iPS-20b Cell Line	embryonic stem cell
31	chr9:100403400-100444200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
32	chr9:100403600-100453800	Strong transcription	Rectal Mucosa Donor 29	rectum
33	chr9:100403800-100436200	Strong transcription	Adipose Nuclei	Adipose
34	chr9:100403800-100439000	Strong transcription	iPS-18 Cell Line	embryonic stem cell
35	chr9:100404000-100435800	Strong transcription	A549	lung
36	chr9:100404000-100449200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
37	chr9:100404400-100422200	Strong transcription	Primary neutrophils fromperipheralblood	blood
38	chr9:100404800-100455400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
39	chr9:100405000-100437800	Strong transcription	GM12878-XiMat	blood
40	chr9:100405800-100438600	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
41	chr9:100406200-100424400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
42	chr9:100406800-100416800	Weak transcription	NHLF	lung
43	chr9:100406800-100418400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
44	chr9:100409400-100439800	Strong transcription	HMEC	breast
45	chr9:100409600-100433200	Strong transcription	Fetal Intestine Large	intestine
46	chr9:100409600-100440000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
47	chr9:100409800-100427800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
48	chr9:100410200-100437800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
49	chr9:100410200-100454000	Strong transcription	Fetal Muscle Trunk	muscle
50	chr9:100410600-100414800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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