The 2.0 version of rSNPBase

Variant report

Variant rs59992945
Chromosome Location chr9:100378022-100378023
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100348800-100384000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr9:100361000-100381200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr9:100361800-100383400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr9:100361800-100389000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr9:100361800-100394000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr9:100362200-100379000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr9:100363000-100394600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr9:100365200-100382200 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr9:100365800-100389400 Weak transcription Stomach Mucosa stomach
10 chr9:100367400-100386200 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr9:100367400-100387000 Weak transcription HMEC breast
12 chr9:100367600-100384000 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr9:100367600-100390400 Weak transcription Small Intestine intestine
14 chr9:100367800-100383800 Weak transcription A549 lung
15 chr9:100367800-100384000 Weak transcription Aorta Aorta
16 chr9:100367800-100384400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr9:100368200-100379400 Weak transcription Gastric stomach
18 chr9:100368200-100380400 Strong transcription Fetal Muscle Trunk muscle
19 chr9:100368200-100386200 Weak transcription Esophagus oesophagus
20 chr9:100368200-100394000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr9:100368200-100394200 Weak transcription Primary neutrophils fromperipheralblood blood
22 chr9:100368400-100379800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr9:100368400-100379800 Weak transcription Right Ventricle heart
24 chr9:100368400-100384000 Weak transcription Pancreas Pancrea
25 chr9:100368400-100387800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr9:100368400-100394000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr9:100368600-100379800 Weak transcription Hela-S3 cervix
28 chr9:100369000-100378600 Weak transcription NHLF lung
29 chr9:100369000-100386400 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr9:100369000-100388200 Strong transcription Fetal Muscle Leg muscle
31 chr9:100369600-100382600 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr9:100370800-100379400 Strong transcription Fetal Thymus thymus
33 chr9:100371000-100382400 Weak transcription Fetal Intestine Small intestine
34 chr9:100371200-100382800 Strong transcription HUES64 Cell Line embryonic stem cell
35 chr9:100372000-100380400 Strong transcription Placenta Placenta
36 chr9:100372200-100388200 Strong transcription Fetal Adrenal Gland Adrenal Gland
37 chr9:100372800-100383200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr9:100372800-100387600 Weak transcription Psoas Muscle Psoas
39 chr9:100372800-100394000 Weak transcription Colonic Mucosa Colon
40 chr9:100373000-100383800 Weak transcription Placenta Amnion Placenta Amnion
41 chr9:100373000-100389400 Weak transcription Pancreatic Islets Pancreatic Islet
42 chr9:100373200-100386600 Weak transcription HUVEC blood vessel
43 chr9:100373400-100380200 Strong transcription Dnd41 blood
44 chr9:100373400-100381000 Weak transcription HSMM muscle
45 chr9:100373400-100389400 Weak transcription NHDF-Ad bronchial
46 chr9:100373600-100378600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr9:100373800-100378400 Weak transcription Spleen Spleen
48 chr9:100373800-100382400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr9:100373800-100383800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr9:100374000-100383200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015