The 2.0 version of rSNPBase

Variant report

Variant rs56200116
Chromosome Location chr9:100462412-100462413
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100459800-100466400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr9:100460000-100465400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr9:100460200-100462600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr9:100460200-100462600 Enhancers Primary monocytes fromperipheralblood blood
5 chr9:100460200-100465400 Weak transcription HSMM muscle
6 chr9:100460400-100465000 Weak transcription Fetal Intestine Small intestine
7 chr9:100460400-100465200 Weak transcription Liver Liver
8 chr9:100460400-100465200 Weak transcription Hela-S3 cervix
9 chr9:100460400-100465400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr9:100460400-100465400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr9:100460400-100465400 Weak transcription Fetal Intestine Large intestine
12 chr9:100460400-100465400 Weak transcription HSMMtube muscle
13 chr9:100460400-100465600 Weak transcription Pancreas Pancrea
14 chr9:100460400-100465600 Weak transcription HUVEC blood vessel
15 chr9:100460400-100465800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr9:100460400-100465800 Weak transcription Rectal Smooth Muscle rectum
17 chr9:100460400-100465800 Weak transcription Stomach Mucosa stomach
18 chr9:100460400-100467000 Weak transcription Esophagus oesophagus
19 chr9:100460400-100467800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr9:100460600-100462800 Enhancers HepG2 liver
21 chr9:100460600-100465000 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr9:100460600-100465200 Weak transcription Fetal Kidney kidney
23 chr9:100460600-100465200 Weak transcription A549 lung
24 chr9:100461400-100467800 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr9:100461600-100465400 Weak transcription HMEC breast
26 chr9:100461600-100467200 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr9:100462200-100462600 Enhancers Primary hematopoietic stem cells blood
28 chr9:100462200-100466000 Weak transcription K562 blood
29 chr9:100462400-100462600 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin
30 chr9:100462400-100465200 Weak transcription GM12878-XiMat blood
31 chr9:100462400-100472800 Weak transcription Brain Substantia Nigra brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015