The 2.0 version of rSNPBase

Variant report

Variant rs60359353
Chromosome Location chr9:100394225-100394226
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100363000-100394600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr9:100380400-100394400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr9:100385000-100394600 Weak transcription Lung lung
4 chr9:100388200-100394400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr9:100388200-100394400 Weak transcription Aorta Aorta
6 chr9:100389600-100394400 Weak transcription Thymus Thymus
7 chr9:100391600-100394400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr9:100391600-100394400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr9:100391600-100394600 Weak transcription Ovary ovary
10 chr9:100391600-100394800 Weak transcription Gastric stomach
11 chr9:100393400-100394400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr9:100393400-100394400 Enhancers Pancreas Pancrea
13 chr9:100393600-100394400 Enhancers Primary T helper naive cells from peripheral blood blood
14 chr9:100393600-100394400 Enhancers Primary T killer memory cells from peripheral blood blood
15 chr9:100393600-100394400 Enhancers Left Ventricle heart
16 chr9:100393600-100394400 Enhancers Skeletal Muscle Female skeletal muscle
17 chr9:100393600-100394600 Enhancers Small Intestine intestine
18 chr9:100393600-100394600 Flanking Active TSS K562 blood
19 chr9:100393800-100394400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr9:100393800-100394400 Enhancers Primary monocytes fromperipheralblood blood
21 chr9:100393800-100394400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
22 chr9:100393800-100394400 Enhancers Brain Hippocampus Middle brain
23 chr9:100393800-100394400 Enhancers Brain Substantia Nigra brain
24 chr9:100393800-100394400 Enhancers Fetal Muscle Trunk muscle
25 chr9:100393800-100394600 Enhancers Primary T cells fromperipheralblood blood
26 chr9:100393800-100394600 Enhancers Primary T helper cells fromperipheralblood blood
27 chr9:100393800-100394600 Enhancers Primary T regulatory cells fromperipheralblood blood
28 chr9:100393800-100394800 Flanking Active TSS Fetal Brain Female brain
29 chr9:100393800-100394800 Flanking Active TSS Hela-S3 cervix
30 chr9:100393800-100397200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr9:100394000-100394400 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr9:100394000-100394400 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr9:100394000-100394400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr9:100394000-100394400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr9:100394000-100394400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr9:100394000-100394400 Enhancers Primary B cells from cord blood blood
37 chr9:100394000-100394400 Enhancers Primary hematopoietic stem cells blood
38 chr9:100394000-100394400 Enhancers Primary T helper naive cells fromperipheralblood blood
39 chr9:100394000-100394400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr9:100394000-100394400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr9:100394000-100394400 Enhancers Fetal Thymus thymus
42 chr9:100394000-100394400 Enhancers Placenta Amnion Placenta Amnion
43 chr9:100394000-100394400 Enhancers Sigmoid Colon Sigmoid Colon
44 chr9:100394000-100394400 Flanking Active TSS HepG2 liver
45 chr9:100394000-100394400 Flanking Active TSS NHDF-Ad bronchial
46 chr9:100394000-100394600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
47 chr9:100394000-100394600 Flanking Active TSS HUES48 Cell Line embryonic stem cell
48 chr9:100394000-100394600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
49 chr9:100394000-100394600 Enhancers Primary Natural Killer cells fromperipheralblood blood
50 chr9:100394000-100394600 Flanking Active TSS Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015