The 2.0 version of rSNPBase

Variant report

Variant rs73552520
Chromosome Location chr9:100360543-100360544
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100333600-100361800 Weak transcription Gastric stomach
2 chr9:100338400-100361600 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr9:100338600-100360800 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr9:100346200-100360800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr9:100348800-100384000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr9:100350400-100361800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr9:100350600-100360800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr9:100351200-100361800 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr9:100353000-100362800 Weak transcription Esophagus oesophagus
10 chr9:100353200-100362200 Enhancers Fetal Brain Male brain
11 chr9:100353200-100363200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr9:100354000-100360800 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr9:100354000-100360800 Weak transcription Lung lung
14 chr9:100354200-100360600 Weak transcription GM12878-XiMat blood
15 chr9:100354800-100363000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr9:100355000-100360800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr9:100355000-100360800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr9:100355000-100360800 Enhancers Skeletal Muscle Male skeletal muscle
19 chr9:100355400-100360800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr9:100356600-100361400 Enhancers Brain Hippocampus Middle brain
21 chr9:100356800-100362400 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr9:100357000-100362800 Weak transcription HSMM muscle
23 chr9:100357200-100360800 Weak transcription H1 Cell Line embryonic stem cell
24 chr9:100357200-100360800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr9:100357200-100363000 Weak transcription Pancreas Pancrea
26 chr9:100357200-100363800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr9:100357400-100360600 Weak transcription Fetal Muscle Leg muscle
28 chr9:100357400-100360800 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr9:100357400-100360800 Enhancers Skeletal Muscle Female skeletal muscle
30 chr9:100357400-100363000 Weak transcription HSMMtube muscle
31 chr9:100357800-100360800 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr9:100358400-100362000 Enhancers Right Atrium heart
33 chr9:100358600-100360800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr9:100358600-100360800 Enhancers Brain Anterior Caudate brain
35 chr9:100358600-100361000 Enhancers Duodenum Smooth Muscle Duodenum
36 chr9:100358600-100361400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
37 chr9:100358600-100361600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr9:100358800-100361000 Enhancers Rectal Smooth Muscle rectum
39 chr9:100358800-100361200 Enhancers Brain Inferior Temporal Lobe brain
40 chr9:100359000-100362400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr9:100359000-100363000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr9:100359200-100360600 Weak transcription K562 blood
43 chr9:100359200-100360800 Weak transcription Ovary ovary
44 chr9:100359200-100361200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr9:100359200-100361800 Enhancers Fetal Brain Female brain
46 chr9:100359200-100363400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr9:100359400-100360600 Weak transcription Brain Angular Gyrus brain
48 chr9:100359400-100361600 Enhancers Adipose Nuclei Adipose
49 chr9:100359600-100360600 Weak transcription Colon Smooth Muscle Colon
50 chr9:100359600-100361400 Enhancers Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015