Variant report

Variant	rs7018546
Chromosome Location	chr9:100387093-100387094
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:100264233..100266882-chr9:100385504..100387245,2	MCF-7	breast:

Extended variants
information (count: 194 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:191)

rs_ID	r²[population]
rs1034098	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1034099	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs1034100	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs10512254	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1116208	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1126122	1.00[ASN][1000 genomes]
rs12345701	0.90[ASN][1000 genomes]
rs12349801	0.85[ASN][1000 genomes]
rs14066	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1411344	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1543636	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16922319	0.95[ASN][1000 genomes]
rs16923033	0.83[YRI][hapmap];0.82[AFR][1000 genomes]
rs16923041	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16923112	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs16923269	1.00[JPT][hapmap];0.87[YRI][hapmap];0.84[ASN][1000 genomes]
rs1813875	0.82[AFR][1000 genomes]
rs1928641	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1928642	0.86[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2282066	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2282067	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2297155	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs2297156	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs2297157	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs2297158	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs2297159	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs2297160	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs2297161	0.82[ASN][1000 genomes]
rs2401635	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs2668794	0.82[JPT][hapmap]
rs2668795	0.82[JPT][hapmap]
rs2668797	0.82[JPT][hapmap]
rs2805783	0.82[JPT][hapmap]
rs2808681	0.82[JPT][hapmap]
rs28403588	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs28403589	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs3176623	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176624	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176626	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176628	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176629	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176634	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.86[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs3176635	0.80[YRI][hapmap]
rs3176637	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176638	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176642	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs3176644	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176645	0.87[ASN][1000 genomes]
rs3176651	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176654	0.87[ASN][1000 genomes]
rs3176659	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176665	0.87[ASN][1000 genomes]
rs3176668	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176669	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176670	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176673	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs3176675	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176682	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176685	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176687	0.80[YRI][hapmap]
rs3176688	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176694	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176698	0.87[ASN][1000 genomes]
rs3176700	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs3176703	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs3176706	0.80[YRI][hapmap]
rs3176708	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176711	0.80[YRI][hapmap]
rs3176712	0.80[YRI][hapmap]
rs3176714	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176720	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176721	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs3176723	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176724	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176726	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176728	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs3176734	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs3176735	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176736	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176739	0.87[ASN][1000 genomes]
rs3176740	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176744	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176746	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176747	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176751	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.80[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs3176752	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs3176758	0.87[ASN][1000 genomes]
rs3176759	0.87[ASN][1000 genomes]
rs3750368	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs3750369	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs3750370	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3763606	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs3802472	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3802473	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3802474	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs3824494	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs3897841	0.95[ASN][1000 genomes]
rs41274252	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs55966848	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs56052819	0.90[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs56060429	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs56164437	0.95[ASN][1000 genomes]
rs56200116	0.90[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs57188235	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs57598118	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs57940370	0.87[ASN][1000 genomes]
rs58146508	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs58387091	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs58390229	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs58637778	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs58878935	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs58933803	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs59205756	0.87[ASN][1000 genomes]
rs59354722	0.90[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs59478543	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs59662386	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs59775587	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs59791764	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs59992945	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs60026475	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs60028882	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs60055057	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs60104153	0.88[AMR][1000 genomes]
rs60359353	1.00[ASN][1000 genomes]
rs60463150	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs60596698	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs60653177	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs60821994	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs60822454	0.80[ASN][1000 genomes]
rs61152667	0.97[ASN][1000 genomes]
rs61208411	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs61221847	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61276200	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61440789	0.90[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs61445476	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61739366	0.86[AFR][1000 genomes]
rs6478304	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs6478305	0.80[YRI][hapmap];0.85[AFR][1000 genomes]
rs7025403	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7036604	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7045160	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs7049183	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7341850	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73498323	0.85[AFR][1000 genomes]
rs73498324	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73498329	0.83[AFR][1000 genomes]
rs73498332	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73498338	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73498347	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73498348	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73498355	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73498358	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73498359	0.82[AFR][1000 genomes]
rs73498362	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73498377	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73498380	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73498381	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73498394	0.87[ASN][1000 genomes]
rs73500325	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73500326	0.88[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73500328	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73500393	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73500395	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73500396	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73500397	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73500398	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73500400	0.91[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs73502204	0.87[ASN][1000 genomes]
rs73551090	0.86[AFR][1000 genomes]
rs73552509	0.88[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs73552512	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs73552520	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs73554629	0.97[ASN][1000 genomes]
rs73554631	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs73554641	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs73554646	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs73554650	0.86[AFR][1000 genomes]
rs73554652	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7850986	0.91[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs7853179	0.96[YRI][hapmap];0.83[AFR][1000 genomes]
rs7856316	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7857174	0.86[AFR][1000 genomes]
rs7859684	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7859979	0.86[AFR][1000 genomes]
rs7862356	0.90[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs7866961	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7867046	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7869683	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs953198	0.82[JPT][hapmap]
rs9539	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs9777684	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039240	chr9:100292680-100415269	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
2	nsv540179	chr9:100292680-100415269	Genic enhancers Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
3	nsv893610	chr9:100324086-100496160	Active TSS Strong transcription Enhancers ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:100361800-100389000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr9:100361800-100394000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
3	chr9:100363000-100394600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr9:100365800-100389400	Weak transcription	Stomach Mucosa	stomach
5	chr9:100367600-100390400	Weak transcription	Small Intestine	intestine
6	chr9:100368200-100394000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr9:100368200-100394200	Weak transcription	Primary neutrophils fromperipheralblood	blood
8	chr9:100368400-100387800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
9	chr9:100368400-100394000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr9:100369000-100388200	Strong transcription	Fetal Muscle Leg	muscle
11	chr9:100372200-100388200	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr9:100372800-100387600	Weak transcription	Psoas Muscle	Psoas
13	chr9:100372800-100394000	Weak transcription	Colonic Mucosa	Colon
14	chr9:100373000-100389400	Weak transcription	Pancreatic Islets	Pancreatic Islet
15	chr9:100373400-100389400	Weak transcription	NHDF-Ad	bronchial
16	chr9:100374000-100394000	Weak transcription	Muscle Satellite Cultured Cells	--
17	chr9:100374600-100393800	Weak transcription	Fetal Kidney	kidney
18	chr9:100375600-100387600	Weak transcription	NH-A	brain
19	chr9:100376000-100387400	Weak transcription	Brain Substantia Nigra	brain
20	chr9:100377400-100394000	Weak transcription	NHEK	skin
21	chr9:100378000-100387600	Weak transcription	Rectal Smooth Muscle	rectum
22	chr9:100378400-100388200	Strong transcription	Fetal Lung	lung
23	chr9:100378400-100388400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr9:100378600-100387800	Strong transcription	Skeletal Muscle Female	skeletal muscle
25	chr9:100378600-100388200	Strong transcription	Stomach Smooth Muscle	stomach
26	chr9:100378600-100388400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
27	chr9:100379000-100387600	Weak transcription	Rectal Mucosa Donor 31	rectum
28	chr9:100379200-100388000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
29	chr9:100379400-100388200	Strong transcription	Primary T cells from cord blood	blood
30	chr9:100380200-100387600	Weak transcription	Brain Hippocampus Middle	brain
31	chr9:100380400-100394400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
32	chr9:100381200-100388200	Strong transcription	Fetal Brain Female	brain
33	chr9:100381600-100387400	Weak transcription	Hela-S3	cervix
34	chr9:100381800-100394200	Weak transcription	HSMMtube	muscle
35	chr9:100382400-100388200	Strong transcription	Fetal Intestine Large	intestine
36	chr9:100382600-100388200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
37	chr9:100382800-100388200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
38	chr9:100382800-100388200	Strong transcription	Brain Inferior Temporal Lobe	brain
39	chr9:100383000-100388400	Strong transcription	Primary monocytes fromperipheralblood	blood
40	chr9:100383000-100388600	Strong transcription	Fetal Muscle Trunk	muscle
41	chr9:100383200-100389200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
42	chr9:100383600-100388200	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
43	chr9:100383600-100390400	Strong transcription	Monocytes-CD14+_RO01746	blood
44	chr9:100383800-100387400	Strong transcription	Brain Germinal Matrix	brain
45	chr9:100383800-100388200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
46	chr9:100383800-100388200	Strong transcription	Liver	Liver
47	chr9:100383800-100388200	Strong transcription	Duodenum Smooth Muscle	Duodenum
48	chr9:100383800-100388200	Strong transcription	Dnd41	blood
49	chr9:100384000-100391200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
50	chr9:100384200-100388200	Strong transcription	Adipose Nuclei	Adipose

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