The 2.0 version of rSNPBase

Variant report

Variant rs59478543
Chromosome Location chr9:100382477-100382478
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100348800-100384000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr9:100361800-100383400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr9:100361800-100389000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr9:100361800-100394000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr9:100363000-100394600 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr9:100365800-100389400 Weak transcription Stomach Mucosa stomach
7 chr9:100367400-100386200 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr9:100367400-100387000 Weak transcription HMEC breast
9 chr9:100367600-100384000 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr9:100367600-100390400 Weak transcription Small Intestine intestine
11 chr9:100367800-100383800 Weak transcription A549 lung
12 chr9:100367800-100384000 Weak transcription Aorta Aorta
13 chr9:100367800-100384400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr9:100368200-100386200 Weak transcription Esophagus oesophagus
15 chr9:100368200-100394000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr9:100368200-100394200 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr9:100368400-100384000 Weak transcription Pancreas Pancrea
18 chr9:100368400-100387800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr9:100368400-100394000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr9:100369000-100386400 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr9:100369000-100388200 Strong transcription Fetal Muscle Leg muscle
22 chr9:100369600-100382600 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr9:100371200-100382800 Strong transcription HUES64 Cell Line embryonic stem cell
24 chr9:100372200-100388200 Strong transcription Fetal Adrenal Gland Adrenal Gland
25 chr9:100372800-100383200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr9:100372800-100387600 Weak transcription Psoas Muscle Psoas
27 chr9:100372800-100394000 Weak transcription Colonic Mucosa Colon
28 chr9:100373000-100383800 Weak transcription Placenta Amnion Placenta Amnion
29 chr9:100373000-100389400 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr9:100373200-100386600 Weak transcription HUVEC blood vessel
31 chr9:100373400-100389400 Weak transcription NHDF-Ad bronchial
32 chr9:100373800-100383800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr9:100374000-100383200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr9:100374000-100383800 Weak transcription H9 Cell Line embryonic stem cell
35 chr9:100374000-100386200 Weak transcription Osteobl bone
36 chr9:100374000-100394000 Weak transcription Muscle Satellite Cultured Cells --
37 chr9:100374200-100383200 Weak transcription Ovary ovary
38 chr9:100374200-100384400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr9:100374400-100382800 Weak transcription Lung lung
40 chr9:100374400-100386200 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr9:100374600-100393800 Weak transcription Fetal Kidney kidney
42 chr9:100375600-100387600 Weak transcription NH-A brain
43 chr9:100376000-100382600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr9:100376000-100387400 Weak transcription Brain Substantia Nigra brain
45 chr9:100376400-100383600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr9:100376600-100383200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr9:100377200-100383800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr9:100377200-100383800 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr9:100377400-100394000 Weak transcription NHEK skin
50 chr9:100377800-100386200 Weak transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015