The 2.0 version of rSNPBase

Variant report

Variant rs56164437
Chromosome Location chr9:100357155-100357156
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100333600-100361800 Weak transcription Gastric stomach
2 chr9:100336200-100360000 Weak transcription Brain Substantia Nigra brain
3 chr9:100338400-100361600 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr9:100338600-100360800 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr9:100341200-100358400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr9:100346200-100360800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr9:100348800-100384000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr9:100350400-100361800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr9:100350600-100360800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr9:100351200-100361800 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr9:100353000-100362800 Weak transcription Esophagus oesophagus
12 chr9:100353200-100362200 Enhancers Fetal Brain Male brain
13 chr9:100353200-100363200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr9:100353400-100359200 Strong transcription K562 blood
15 chr9:100353600-100358600 Enhancers Fetal Heart heart
16 chr9:100354000-100360800 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr9:100354000-100360800 Weak transcription Lung lung
18 chr9:100354200-100360600 Weak transcription GM12878-XiMat blood
19 chr9:100354800-100357400 Enhancers Fetal Muscle Leg muscle
20 chr9:100354800-100363000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr9:100355000-100360800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr9:100355000-100360800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr9:100355000-100360800 Enhancers Skeletal Muscle Male skeletal muscle
24 chr9:100355400-100360800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr9:100355600-100357400 Enhancers Rectal Smooth Muscle rectum
26 chr9:100355600-100357800 Enhancers Colon Smooth Muscle Colon
27 chr9:100355600-100359200 Weak transcription Brain Germinal Matrix brain
28 chr9:100356000-100357400 Enhancers Brain Cingulate Gyrus brain
29 chr9:100356200-100357200 Genic enhancers Aorta Aorta
30 chr9:100356200-100357200 Enhancers Fetal Muscle Trunk muscle
31 chr9:100356200-100357800 Enhancers Brain Inferior Temporal Lobe brain
32 chr9:100356400-100357400 Enhancers HSMMtube muscle
33 chr9:100356400-100358800 Enhancers Fetal Brain Female brain
34 chr9:100356600-100357200 Strong transcription Ovary ovary
35 chr9:100356600-100357200 Enhancers Pancreas Pancrea
36 chr9:100356600-100357400 Enhancers Brain Angular Gyrus brain
37 chr9:100356600-100357600 Enhancers Brain Anterior Caudate brain
38 chr9:100356600-100361400 Enhancers Brain Hippocampus Middle brain
39 chr9:100356800-100357200 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr9:100356800-100357200 Flanking Active TSS Stomach Smooth Muscle stomach
41 chr9:100356800-100357400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
42 chr9:100356800-100362400 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr9:100357000-100357200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr9:100357000-100357200 Enhancers Skeletal Muscle Female skeletal muscle
45 chr9:100357000-100358400 Weak transcription Left Ventricle heart
46 chr9:100357000-100358400 Weak transcription Psoas Muscle Psoas
47 chr9:100357000-100358400 Weak transcription Right Atrium heart
48 chr9:100357000-100358600 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr9:100357000-100359400 Weak transcription Adipose Nuclei Adipose
50 chr9:100357000-100360200 Weak transcription Right Ventricle heart

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015