The 2.0 version of rSNPBase

Variant report

Variant rs73498394
Chromosome Location chr9:100427069-100427070
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100400800-100451600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr9:100401200-100429000 Strong transcription Primary hematopoietic stem cells short term culture blood
3 chr9:100401200-100456000 Strong transcription Primary T regulatory cells fromperipheralblood blood
4 chr9:100402400-100439600 Strong transcription HUES64 Cell Line embryonic stem cell
5 chr9:100402400-100451400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr9:100402400-100455600 Strong transcription Dnd41 blood
7 chr9:100402600-100456000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
8 chr9:100402600-100456200 Strong transcription Primary B cells from peripheral blood blood
9 chr9:100402800-100429000 Strong transcription Primary T helper cells fromperipheralblood blood
10 chr9:100402800-100454200 Strong transcription Fetal Thymus thymus
11 chr9:100402800-100456000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr9:100403000-100428400 Strong transcription Primary T helper cells PMA-I stimulated --
13 chr9:100403000-100439400 Strong transcription HUES48 Cell Line embryonic stem cell
14 chr9:100403000-100439800 Strong transcription HUES6 Cell Line embryonic stem cell
15 chr9:100403000-100449400 Strong transcription HSMM muscle
16 chr9:100403000-100450400 Strong transcription Duodenum Mucosa Duodenum
17 chr9:100403000-100454400 Strong transcription Placenta Placenta
18 chr9:100403000-100454600 Strong transcription Breast Myoepithelial Primary Cells Breast
19 chr9:100403200-100454400 Strong transcription Rectal Mucosa Donor 31 rectum
20 chr9:100403200-100455000 Strong transcription Primary T cells fromperipheralblood blood
21 chr9:100403400-100434400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr9:100403400-100439600 Strong transcription iPS-20b Cell Line embryonic stem cell
23 chr9:100403400-100444200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr9:100403600-100453800 Strong transcription Rectal Mucosa Donor 29 rectum
25 chr9:100403800-100436200 Strong transcription Adipose Nuclei Adipose
26 chr9:100403800-100439000 Strong transcription iPS-18 Cell Line embryonic stem cell
27 chr9:100404000-100435800 Strong transcription A549 lung
28 chr9:100404000-100449200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr9:100404800-100455400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr9:100405000-100437800 Strong transcription GM12878-XiMat blood
31 chr9:100405800-100438600 Strong transcription Primary T helper naive cells fromperipheralblood blood
32 chr9:100409400-100439800 Strong transcription HMEC breast
33 chr9:100409600-100433200 Strong transcription Fetal Intestine Large intestine
34 chr9:100409600-100440000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr9:100409800-100427800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr9:100410200-100437800 Weak transcription ES-WA7 Cell Line embryonic stem cell
37 chr9:100410200-100454000 Strong transcription Fetal Muscle Trunk muscle
38 chr9:100411200-100451000 Strong transcription Liver Liver
39 chr9:100412400-100427800 Strong transcription NHEK skin
40 chr9:100412400-100438200 Strong transcription Fetal Muscle Leg muscle
41 chr9:100412400-100438400 Strong transcription Colon Smooth Muscle Colon
42 chr9:100412400-100439000 Strong transcription H1 Cell Line embryonic stem cell
43 chr9:100412600-100439000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr9:100412600-100454200 Strong transcription Duodenum Smooth Muscle Duodenum
45 chr9:100413000-100451800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr9:100413400-100437800 Strong transcription Stomach Smooth Muscle stomach
47 chr9:100413400-100438600 Strong transcription Primary T cells from cord blood blood
48 chr9:100414000-100438400 Strong transcription Sigmoid Colon Sigmoid Colon
49 chr9:100414200-100438600 Strong transcription Brain Hippocampus Middle brain
50 chr9:100414400-100428600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015