Variant report

Variant	rs58790127
Chromosome Location	chr9:96168004-96168005
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:96161251..96163249-chr9:96166631..96169519,2	MCF-7	breast:
2	chr9:95525386..95528085-chr9:96166770..96168958,2	K562	blood:

Variant related genes	Relation type
ENSG00000185963	Chromatin interaction

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs10046907	0.81[EUR][1000 genomes]
rs10124517	0.86[EUR][1000 genomes]
rs10512224	0.95[EUR][1000 genomes]
rs10512226	1.00[EUR][1000 genomes]
rs12552189	0.86[EUR][1000 genomes]
rs12553275	1.00[EUR][1000 genomes]
rs1331588	1.00[EUR][1000 genomes]
rs16909211	0.95[EUR][1000 genomes]
rs1889338	0.86[EUR][1000 genomes]
rs1931369	0.86[EUR][1000 genomes]
rs1931372	0.81[EUR][1000 genomes]
rs2151714	0.86[EUR][1000 genomes]
rs28403269	1.00[EUR][1000 genomes]
rs3897285	0.90[EUR][1000 genomes]
rs4469524	0.86[EUR][1000 genomes]
rs4548243	0.86[EUR][1000 genomes]
rs4573340	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs4743916	0.81[EUR][1000 genomes]
rs4743920	0.81[EUR][1000 genomes]
rs4744229	0.81[EUR][1000 genomes]
rs55649770	0.98[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs55702483	1.00[EUR][1000 genomes]
rs55812345	0.95[EUR][1000 genomes]
rs56375911	1.00[EUR][1000 genomes]
rs57303681	0.91[EUR][1000 genomes]
rs57631285	0.90[EUR][1000 genomes]
rs60212988	1.00[EUR][1000 genomes]
rs60253984	0.90[EUR][1000 genomes]
rs60650773	0.90[EUR][1000 genomes]
rs61340241	0.90[EUR][1000 genomes]
rs6479479	0.81[EUR][1000 genomes]
rs6479480	0.86[EUR][1000 genomes]
rs7020195	1.00[EUR][1000 genomes]
rs7038564	0.81[EUR][1000 genomes]
rs73651204	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs73651206	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73651227	1.00[EUR][1000 genomes]
rs73651228	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73651229	1.00[EUR][1000 genomes]
rs73651232	1.00[EUR][1000 genomes]
rs73651246	0.90[EUR][1000 genomes]
rs73651248	0.90[EUR][1000 genomes]
rs7854217	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7854349	1.00[EUR][1000 genomes]
rs7861929	0.95[EUR][1000 genomes]
rs7874126	0.95[EUR][1000 genomes]
rs999326	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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