Variant report

Variant rs871902
Chromosome Location chr16:48593779-48593780
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:48577200-48596800 Weak transcription Colonic Mucosa Colon
2 chr16:48578400-48601800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr16:48580800-48594600 Weak transcription Fetal Kidney kidney
4 chr16:48583800-48617800 Weak transcription H9 Cell Line embryonic stem cell
5 chr16:48585400-48594600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr16:48586200-48597400 Enhancers Primary monocytes fromperipheralblood blood
7 chr16:48586400-48593800 Weak transcription Primary hematopoietic stem cells blood
8 chr16:48586400-48594400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr16:48587400-48594400 Weak transcription Fetal Thymus thymus
10 chr16:48587400-48594800 Enhancers Fetal Heart heart
11 chr16:48588400-48594800 Enhancers Primary T killer naive cells fromperipheralblood blood
12 chr16:48588600-48593800 Enhancers Breast Myoepithelial Primary Cells Breast
13 chr16:48588600-48594200 Enhancers Primary T helper 17 cells PMA-I stimulated --
14 chr16:48588800-48596000 Enhancers Primary T helper naive cells fromperipheralblood blood
15 chr16:48588800-48597200 Enhancers Liver Liver
16 chr16:48589000-48595800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
17 chr16:48589200-48594000 Enhancers Primary T killer memory cells from peripheral blood blood
18 chr16:48589200-48594400 Enhancers Primary T helper cells PMA-I stimulated --
19 chr16:48589400-48594600 Enhancers Primary T helper cells fromperipheralblood blood
20 chr16:48589400-48594800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
21 chr16:48589400-48594800 Weak transcription Pancreas Pancrea
22 chr16:48589400-48601400 Weak transcription Gastric stomach
23 chr16:48589400-48603400 Weak transcription Esophagus oesophagus
24 chr16:48589400-48608800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr16:48589400-48609400 Weak transcription Thymus Thymus
26 chr16:48589400-48609600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr16:48589600-48593800 Weak transcription Primary B cells from peripheral blood blood
28 chr16:48589600-48594200 Enhancers Primary T helper naive cells from peripheral blood blood
29 chr16:48590000-48596400 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr16:48590000-48604200 Weak transcription Spleen Spleen
31 chr16:48590600-48594200 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr16:48590800-48595800 Genic enhancers HepG2 liver
33 chr16:48591000-48593800 Weak transcription K562 blood
34 chr16:48591000-48594000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr16:48591200-48594000 Weak transcription Placenta Amnion Placenta Amnion
36 chr16:48591200-48594400 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr16:48591200-48607600 Weak transcription Hela-S3 cervix
38 chr16:48591200-48611400 Weak transcription Fetal Intestine Small intestine
39 chr16:48591200-48611600 Weak transcription Fetal Brain Female brain
40 chr16:48591400-48594600 Weak transcription Duodenum Mucosa Duodenum
41 chr16:48591400-48595800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr16:48591400-48617200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr16:48591600-48595800 Weak transcription A549 lung
44 chr16:48591600-48596200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr16:48591800-48593800 Enhancers Adipose Nuclei Adipose
46 chr16:48592200-48594800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr16:48592400-48593800 Enhancers Aorta Aorta
48 chr16:48592400-48594000 Genic enhancers HUES64 Cell Line embryonic stem cell
49 chr16:48592400-48594000 Enhancers Left Ventricle heart
50 chr16:48592400-48594000 Enhancers Rectal Smooth Muscle rectum

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