Variant report

Variant rs8057777
Chromosome Location chr16:48565643-48565644
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:48559200-48571600 Weak transcription Cortex derived primary cultured neurospheres brain
2 chr16:48559600-48570400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr16:48561000-48569400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr16:48561000-48569400 Weak transcription Colonic Mucosa Colon
5 chr16:48561000-48570200 Weak transcription Fetal Intestine Small intestine
6 chr16:48561000-48574400 Weak transcription Fetal Intestine Large intestine
7 chr16:48561000-48575200 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr16:48564000-48570400 Weak transcription Thymus Thymus
9 chr16:48564600-48566200 Enhancers Skeletal Muscle Male skeletal muscle
10 chr16:48564800-48566600 Enhancers Fetal Muscle Trunk muscle
11 chr16:48564800-48566600 Enhancers Fetal Muscle Leg muscle
12 chr16:48565000-48566200 Enhancers Muscle Satellite Cultured Cells --
13 chr16:48565000-48566200 Enhancers HepG2 liver
14 chr16:48565000-48566400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr16:48565000-48566400 Enhancers Psoas Muscle Psoas
16 chr16:48565000-48566400 Enhancers Skeletal Muscle Female skeletal muscle
17 chr16:48565200-48565800 Enhancers HSMM muscle
18 chr16:48565200-48566200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
19 chr16:48565200-48566200 Enhancers Fetal Lung lung
20 chr16:48565200-48566200 Enhancers NHLF lung
21 chr16:48565200-48566400 Enhancers Fetal Stomach stomach
22 chr16:48565200-48566400 Enhancers NHDF-Ad bronchial
23 chr16:48565400-48565800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr16:48565400-48565800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr16:48565400-48565800 Enhancers Placenta Placenta
26 chr16:48565400-48566200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
27 chr16:48565400-48566200 Enhancers Stomach Smooth Muscle stomach
28 chr16:48565400-48568400 Weak transcription Lung lung
29 chr16:48565400-48569400 Weak transcription Fetal Thymus thymus
30 chr16:48565600-48565800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr16:48565600-48565800 Enhancers HUES6 Cell Line embryonic stem cell
32 chr16:48565600-48565800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr16:48565600-48565800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr16:48565600-48565800 Enhancers Fetal Brain Female brain
35 chr16:48565600-48565800 Enhancers Gastric stomach
36 chr16:48565600-48566000 Flanking Active TSS Adipose Nuclei Adipose
37 chr16:48565600-48566400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr16:48565600-48566400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr16:48565600-48566400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
40 chr16:48565600-48566400 Enhancers Fetal Brain Male brain
41 chr16:48565600-48566400 Enhancers Stomach Mucosa stomach
42 chr16:48565600-48573000 Enhancers Breast Myoepithelial Primary Cells Breast

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