Variant report

Variant rs13331902
Chromosome Location chr16:48644989-48644990
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:48641800-48645200 Active TSS ES-I3 Cell Line embryonic stem cell
2 chr16:48642600-48645000 Active TSS iPS-15b Cell Line embryonic stem cell
3 chr16:48642800-48645000 Active TSS A549 lung
4 chr16:48642800-48645200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr16:48642800-48645200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
6 chr16:48642800-48645200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr16:48643000-48645000 Active TSS Breast Myoepithelial Primary Cells Breast
8 chr16:48643000-48645000 Active TSS Fetal Brain Female brain
9 chr16:48643200-48645200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr16:48643200-48645400 Active TSS K562 blood
11 chr16:48643400-48645200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
12 chr16:48643600-48645200 Active TSS Adipose Nuclei Adipose
13 chr16:48644200-48645600 Weak transcription Small Intestine intestine
14 chr16:48644200-48647800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
15 chr16:48644200-48655400 Weak transcription Spleen Spleen
16 chr16:48644400-48645600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr16:48644400-48645600 Weak transcription Lung lung
18 chr16:48644400-48645800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr16:48644600-48645000 Enhancers Primary B cells from peripheral blood blood
20 chr16:48644600-48645000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
21 chr16:48644600-48645000 Active TSS Skeletal Muscle Female skeletal muscle
22 chr16:48644600-48645000 Active TSS HepG2 liver
23 chr16:48644600-48645000 Enhancers Monocytes-CD14+_RO01746 blood
24 chr16:48644600-48645000 Enhancers NHEK skin
25 chr16:48644600-48645200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
26 chr16:48644600-48645200 Enhancers Primary T regulatory cells fromperipheralblood blood
27 chr16:48644600-48645200 Enhancers Primary T killer memory cells from peripheral blood blood
28 chr16:48644600-48645200 Weak transcription Colonic Mucosa Colon
29 chr16:48644600-48645200 Active TSS NH-A brain
30 chr16:48644600-48645400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr16:48644600-48645400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr16:48644600-48645400 Enhancers Primary T cells from cord blood blood
33 chr16:48644600-48645400 Enhancers Primary T helper naive cells fromperipheralblood blood
34 chr16:48644600-48645400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr16:48644600-48645400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr16:48644600-48645400 Enhancers Duodenum Smooth Muscle Duodenum
37 chr16:48644600-48645400 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr16:48644600-48645400 Weak transcription Thymus Thymus
39 chr16:48644600-48645400 Enhancers GM12878-XiMat blood
40 chr16:48644600-48645600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr16:48644600-48645600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr16:48644600-48645600 Enhancers Primary T killer naive cells fromperipheralblood blood
43 chr16:48644600-48645600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr16:48644600-48645600 Weak transcription Left Ventricle heart
45 chr16:48644600-48645600 Weak transcription Pancreas Pancrea
46 chr16:48644600-48646000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
47 chr16:48644600-48646600 Weak transcription ES-WA7 Cell Line embryonic stem cell
48 chr16:48644600-48646600 Enhancers Primary T cells fromperipheralblood blood
49 chr16:48644600-48646600 Enhancers Primary hematopoietic stem cells blood
50 chr16:48644600-48646600 Enhancers Primary T helper cells fromperipheralblood blood

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