Variant report

Variant rs3843724
Chromosome Location chr16:48618573-48618574
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:48595200-48624000 Weak transcription H1 Cell Line embryonic stem cell
2 chr16:48596000-48624400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr16:48596800-48624400 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr16:48605000-48630200 Weak transcription Spleen Spleen
5 chr16:48609800-48624200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr16:48609800-48624200 Weak transcription Fetal Thymus thymus
7 chr16:48609800-48624400 Weak transcription Thymus Thymus
8 chr16:48611000-48624400 Weak transcription Psoas Muscle Psoas
9 chr16:48611000-48624400 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr16:48611800-48626000 Weak transcription Aorta Aorta
11 chr16:48612000-48619200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr16:48612200-48624200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr16:48612400-48621000 Weak transcription Ovary ovary
14 chr16:48612400-48624400 Weak transcription Esophagus oesophagus
15 chr16:48612400-48630200 Weak transcription Gastric stomach
16 chr16:48613000-48620000 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr16:48613200-48621000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr16:48615200-48624400 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr16:48615600-48622600 Weak transcription HUVEC blood vessel
20 chr16:48615600-48624400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr16:48615600-48624400 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr16:48616400-48624400 Weak transcription HepG2 liver
23 chr16:48616600-48618600 Enhancers HSMMtube muscle
24 chr16:48616600-48624400 Weak transcription Primary B cells from cord blood blood
25 chr16:48616800-48619000 Enhancers NHDF-Ad bronchial
26 chr16:48616800-48620200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr16:48617000-48619600 Weak transcription Lung lung
28 chr16:48617000-48620200 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr16:48617000-48624200 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr16:48617200-48618600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr16:48617200-48618600 Enhancers HSMM muscle
32 chr16:48617200-48619000 Enhancers Breast Myoepithelial Primary Cells Breast
33 chr16:48617200-48619000 Enhancers HMEC breast
34 chr16:48617200-48619000 Enhancers Osteobl bone
35 chr16:48617400-48619400 Weak transcription Primary T cells from cord blood blood
36 chr16:48617400-48619800 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr16:48617600-48619000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
38 chr16:48617600-48621000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr16:48617800-48618800 Enhancers Brain Anterior Caudate brain
40 chr16:48618000-48618600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr16:48618000-48620000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
42 chr16:48618000-48621000 Weak transcription Left Ventricle heart
43 chr16:48618000-48623400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr16:48618000-48624200 Weak transcription Brain Cingulate Gyrus brain
45 chr16:48618000-48624400 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr16:48618000-48625000 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr16:48618000-48631600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr16:48618200-48620000 Weak transcription Primary T killer naive cells fromperipheralblood blood
49 chr16:48618200-48620000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr16:48618200-48620600 Enhancers NHEK skin

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