Variant report

Variant rs11588261
Chromosome Location chr1:62904936-62904937
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62901000-62905000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr1:62901000-62905000 Active TSS HUES64 Cell Line embryonic stem cell
3 chr1:62901000-62905000 Active TSS HSMM muscle
4 chr1:62901000-62905200 Active TSS ES-I3 Cell Line embryonic stem cell
5 chr1:62901000-62905200 Active TSS A549 lung
6 chr1:62901000-62905600 Active TSS HUES6 Cell Line embryonic stem cell
7 chr1:62901000-62905800 Active TSS NHLF lung
8 chr1:62901000-62906200 Active TSS GM12878-XiMat blood
9 chr1:62901400-62905000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:62901400-62905000 Active TSS NHDF-Ad bronchial
11 chr1:62901400-62905800 Active TSS K562 blood
12 chr1:62901400-62906000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
13 chr1:62901600-62905200 Active TSS Hela-S3 cervix
14 chr1:62901800-62905000 Active TSS HMEC breast
15 chr1:62902400-62905000 Flanking Active TSS Primary hematopoietic stem cells blood
16 chr1:62903400-62905200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
17 chr1:62903400-62905800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr1:62903600-62905000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr1:62903600-62905000 Flanking Active TSS HUVEC blood vessel
20 chr1:62903600-62914600 Weak transcription Spleen Spleen
21 chr1:62903800-62906400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
22 chr1:62904000-62915200 Weak transcription Lung lung
23 chr1:62904200-62905000 Active TSS H1 Cell Line embryonic stem cell
24 chr1:62904200-62905000 Enhancers Primary monocytes fromperipheralblood blood
25 chr1:62904200-62905000 Enhancers Rectal Mucosa Donor 31 rectum
26 chr1:62904200-62905000 Enhancers Stomach Smooth Muscle stomach
27 chr1:62904200-62905200 Enhancers Primary B cells from cord blood blood
28 chr1:62904200-62905200 Weak transcription Colon Smooth Muscle Colon
29 chr1:62904200-62905200 Enhancers Rectal Smooth Muscle rectum
30 chr1:62904200-62905600 Enhancers Primary neutrophils fromperipheralblood blood
31 chr1:62904200-62905800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
32 chr1:62904200-62906000 Active TSS HepG2 liver
33 chr1:62904200-62906200 Weak transcription Ovary ovary
34 chr1:62904200-62906200 Weak transcription Small Intestine intestine
35 chr1:62904200-62906400 Weak transcription Placenta Placenta
36 chr1:62904200-62906600 Enhancers Primary B cells from peripheral blood blood
37 chr1:62904200-62907400 Weak transcription Left Ventricle heart
38 chr1:62904200-62908400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr1:62904200-62909600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:62904200-62909600 Weak transcription Aorta Aorta
41 chr1:62904200-62909600 Weak transcription Esophagus oesophagus
42 chr1:62904200-62911000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr1:62904200-62911400 Weak transcription H9 Cell Line embryonic stem cell
44 chr1:62904200-62911400 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr1:62904200-62913000 Weak transcription Brain Cingulate Gyrus brain
46 chr1:62904200-62914200 Weak transcription Colonic Mucosa Colon
47 chr1:62904200-62914600 Weak transcription Gastric stomach
48 chr1:62904200-62915400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
49 chr1:62904200-62917800 Weak transcription Pancreas Pancrea
50 chr1:62904200-62931400 Weak transcription HSMMtube muscle

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