The 2.0 version of rSNPBase

Variant report

Variant rs1168027
Chromosome Location chr1:62970184-62970185
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62909800-62977000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:62916000-62977200 Weak transcription Right Ventricle heart
3 chr1:62916600-62976600 Weak transcription Psoas Muscle Psoas
4 chr1:62920000-62971000 Weak transcription Thymus Thymus
5 chr1:62920000-62980200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr1:62922600-62982000 Weak transcription A549 lung
7 chr1:62923200-62979200 Weak transcription Fetal Thymus thymus
8 chr1:62934400-62981200 Weak transcription Stomach Mucosa stomach
9 chr1:62938800-62973800 Weak transcription Esophagus oesophagus
10 chr1:62939200-62978200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr1:62939600-62999800 Weak transcription Gastric stomach
12 chr1:62939600-63040600 Weak transcription Aorta Aorta
13 chr1:62939800-63044400 Weak transcription Placenta Amnion Placenta Amnion
14 chr1:62939800-63060200 Weak transcription Small Intestine intestine
15 chr1:62941000-63001000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr1:62941600-62975400 Weak transcription NHLF lung
17 chr1:62941600-62978600 Weak transcription Rectal Smooth Muscle rectum
18 chr1:62941600-62981400 Weak transcription Brain Inferior Temporal Lobe brain
19 chr1:62941600-62998200 Weak transcription Fetal Heart heart
20 chr1:62941600-63011800 Weak transcription Brain Hippocampus Middle brain
21 chr1:62941800-62972600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr1:62941800-62978400 Weak transcription NHEK skin
23 chr1:62941800-62982000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr1:62941800-62984600 Weak transcription Brain Cingulate Gyrus brain
25 chr1:62941800-63030200 Weak transcription Brain Angular Gyrus brain
26 chr1:62943600-62979400 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr1:62947200-62978600 Weak transcription Ovary ovary
28 chr1:62951200-62980400 Weak transcription Primary monocytes fromperipheralblood blood
29 chr1:62954000-63003400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr1:62954000-63053400 Weak transcription Fetal Brain Male brain
31 chr1:62957200-62977800 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr1:62957800-62998200 Weak transcription Primary T cells from cord blood blood
33 chr1:62957800-63050200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr1:62958200-63010800 Weak transcription Brain Substantia Nigra brain
35 chr1:62958200-63061000 Weak transcription Lung lung
36 chr1:62958400-62971400 Weak transcription Fetal Muscle Leg muscle
37 chr1:62958400-62984600 Weak transcription Brain Germinal Matrix brain
38 chr1:62958400-62997600 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr1:62958400-62998200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr1:62958600-62977200 Weak transcription GM12878-XiMat blood
41 chr1:62958600-62978200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr1:62960000-62970200 Weak transcription Osteobl bone
43 chr1:62960000-62980200 Weak transcription Colonic Mucosa Colon
44 chr1:62960000-62998200 Weak transcription HMEC breast
45 chr1:62960200-62975200 Weak transcription Fetal Kidney kidney
46 chr1:62960200-62977800 Weak transcription Stomach Smooth Muscle stomach
47 chr1:62960200-62984800 Weak transcription Primary B cells from cord blood blood
48 chr1:62960200-62999800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr1:62960400-62975400 Weak transcription Left Ventricle heart
50 chr1:62960400-62981400 Weak transcription iPS-20b Cell Line embryonic stem cell

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Last update: Aug 31, 2015