Variant report

Variant	rs1748197
Chromosome Location	chr1:63056112-63056113
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 228 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:225)

rs_ID	r²[population]
rs1002687	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1007205	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap]
rs10157265	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10158897	0.91[CEU][hapmap];0.88[EUR][1000 genomes]
rs10159255	0.91[CEU][hapmap];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10493322	0.96[CEU][hapmap];0.86[CHB][hapmap];0.88[EUR][1000 genomes]
rs10789112	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10789113	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10789117	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10789118	0.96[CEU][hapmap];0.86[CHB][hapmap];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10789119	0.95[CEU][hapmap];0.86[CHB][hapmap];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10789120	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10889330	0.83[EUR][1000 genomes]
rs10889331	0.84[EUR][1000 genomes]
rs10889332	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes]
rs10889333	0.95[CEU][hapmap];0.86[CHB][hapmap];0.87[EUR][1000 genomes]
rs10889334	0.96[CEU][hapmap];0.86[CHB][hapmap];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10889335	0.91[CEU][hapmap];0.86[CHB][hapmap];0.81[EUR][1000 genomes]
rs10889337	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes]
rs10889338	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10889339	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10889340	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10889342	0.81[ASN][1000 genomes]
rs10889343	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10889344	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10889347	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10889348	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10889349	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10889350	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10889352	0.95[CEU][hapmap];0.85[CHB][hapmap];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10889353	0.95[CEU][hapmap];0.86[CHB][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10889354	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10889356	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10889357	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10889360	0.85[EUR][1000 genomes]
rs11207969	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes]
rs11207970	0.88[EUR][1000 genomes]
rs11207972	0.83[EUR][1000 genomes]
rs11207974	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes]
rs11207976	0.89[EUR][1000 genomes]
rs11207977	0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11207979	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11207980	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11207981	1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11207982	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11207983	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11207984	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11207985	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11207986	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11207990	1.00[CEU][hapmap];0.85[CHB][hapmap];0.84[JPT][hapmap];0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11207992	0.96[CEU][hapmap];0.86[CHB][hapmap];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11207994	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11207995	0.95[CEU][hapmap];0.86[CHB][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11207996	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11207997	0.87[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11207999	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11208000	0.95[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11208001	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11208004	0.95[CEU][hapmap];0.86[CHB][hapmap];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11208007	0.85[EUR][1000 genomes]
rs11485618	0.96[CEU][hapmap];0.84[CHB][hapmap];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11577840	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11588261	0.85[EUR][1000 genomes]
rs1167996	0.89[EUR][1000 genomes]
rs1167998	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.84[EUR][1000 genomes]
rs1168001	0.84[EUR][1000 genomes]
rs1168002	0.84[EUR][1000 genomes]
rs1168003	0.84[EUR][1000 genomes]
rs1168009	0.95[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.84[EUR][1000 genomes]
rs1168010	0.95[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.84[EUR][1000 genomes]
rs1168013	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1168015	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1168017	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1168018	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1168020	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1168021	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1168022	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1168023	1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1168026	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1168027	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1168028	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1168029	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1168030	1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1168031	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1168032	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1168034	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1168036	1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1168040	0.95[CEU][hapmap];0.81[CHB][hapmap];0.95[YRI][hapmap]
rs1168041	0.86[CHB][hapmap];0.80[ASN][1000 genomes]
rs1168042	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1168044	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1168045	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1168046	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1168047	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1168050	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1168085	0.84[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1168086	0.95[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1168089	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1168093	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1168097	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1168098	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1168099	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1168102	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1168103	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1168107	0.93[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1168113	0.96[CEU][hapmap];0.82[CHB][hapmap];0.90[YRI][hapmap];0.89[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1168114	0.96[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1168124	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1168128	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1168132	0.89[CEU][hapmap];0.89[JPT][hapmap];0.95[YRI][hapmap];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1177541	0.81[EUR][1000 genomes]
rs1179765	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1183260	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.89[EUR][1000 genomes]
rs1184547	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1184865	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12023489	0.87[EUR][1000 genomes]
rs12025714	0.81[ASN][1000 genomes]
rs12025800	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12029068	0.87[EUR][1000 genomes]
rs12030293	0.81[ASN][1000 genomes]
rs12037659	0.87[EUR][1000 genomes]
rs12038768	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12039115	0.89[JPT][hapmap]
rs12042319	0.96[CEU][hapmap];0.86[CHB][hapmap];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12047226	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12048208	0.81[ASN][1000 genomes]
rs12062275	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12074528	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12090886	1.00[CEU][hapmap];0.95[YRI][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12116574	0.95[CEU][hapmap];0.86[CHB][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12136083	0.91[CEU][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12239736	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12239737	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12403207	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1305520	0.84[EUR][1000 genomes]
rs1305521	0.89[EUR][1000 genomes]
rs1472257	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1570694	0.95[CEU][hapmap];0.86[CHB][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1627591	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1629122	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1690755	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1690761	0.89[EUR][1000 genomes]
rs1690766	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1748195	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1748199	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1748200	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1748201	1.00[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1781195	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1781212	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1781221	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs1979722	0.91[CEU][hapmap];0.87[EUR][1000 genomes]
rs2029763	0.95[CEU][hapmap];0.86[CHB][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2131925	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2131926	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2366636	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2366638	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2479464	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2489835	0.85[EUR][1000 genomes]
rs28399032	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs34152715	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3850634	0.95[CEU][hapmap];0.86[CHB][hapmap];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3913007	0.95[CEU][hapmap];0.86[CHB][hapmap];0.88[EUR][1000 genomes]
rs4329540	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4344355	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4350231	0.95[CEU][hapmap];0.86[CHB][hapmap];0.83[EUR][1000 genomes]
rs4409689	0.88[AMR][1000 genomes]
rs4459145	0.88[EUR][1000 genomes]
rs4495740	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4587594	0.95[CEU][hapmap];0.86[CHB][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4915838	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4915840	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs583609	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.89[EUR][1000 genomes]
rs597076	0.89[EUR][1000 genomes]
rs597078	0.89[EUR][1000 genomes]
rs597470	0.89[EUR][1000 genomes]
rs598253	0.89[EUR][1000 genomes]
rs61471917	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61775910	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs624660	0.89[EUR][1000 genomes]
rs626787	0.86[CHB][hapmap];0.80[JPT][hapmap];0.87[EUR][1000 genomes]
rs630144	0.87[EUR][1000 genomes]
rs631106	0.95[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.87[EUR][1000 genomes]
rs634341	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.89[EUR][1000 genomes]
rs636497	0.89[EUR][1000 genomes]
rs636523	0.88[EUR][1000 genomes]
rs637723	0.96[CEU][hapmap];0.82[JPT][hapmap];0.90[YRI][hapmap];0.89[EUR][1000 genomes]
rs638305	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.89[EUR][1000 genomes]
rs641540	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.89[EUR][1000 genomes]
rs642845	1.00[CEU][hapmap];0.81[CHB][hapmap];0.90[JPT][hapmap];0.86[YRI][hapmap];0.89[EUR][1000 genomes]
rs656297	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.89[EUR][1000 genomes]
rs6587976	0.89[EUR][1000 genomes]
rs6587980	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs659656	0.96[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.91[YRI][hapmap];0.89[EUR][1000 genomes]
rs6657050	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6666816	0.88[AMR][1000 genomes]
rs6675401	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6678483	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6682423	0.96[CEU][hapmap];0.88[AMR][1000 genomes]
rs6686331	0.86[AMR][1000 genomes]
rs6690733	1.00[CEU][hapmap];0.80[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6693353	0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6696502	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs746735	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7518497	0.85[EUR][1000 genomes]
rs7519785	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7520810	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7527004	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7531579	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7534572	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7539035	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7547965	0.81[EUR][1000 genomes]
rs7548877	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7555577	0.92[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs783291	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.89[EUR][1000 genomes]
rs880694	0.96[CEU][hapmap];0.88[AMR][1000 genomes]
rs9436221	0.81[EUR][1000 genomes]
rs9436222	0.81[EUR][1000 genomes]
rs9436223	0.87[EUR][1000 genomes]
rs9436661	0.87[EUR][1000 genomes]
rs9787151	0.88[AMR][1000 genomes]
rs9787156	0.88[AMR][1000 genomes]
rs993013	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs995000	0.95[CEU][hapmap];0.86[CHB][hapmap];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs998403	0.96[CEU][hapmap];0.86[CHB][hapmap];0.88[EUR][1000 genomes]
rs9988450	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1817371	chr1:62901935-63129697	Flanking Active TSS Active TSS Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
2	nsv1014376	chr1:62976472-63181359	Enhancers Strong transcription Weak transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
3	nsv1011203	chr1:63047046-63081879	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs1748197	DOCK7	cis	uninvolved skin	skin_eQTL
rs1748197	DOCK7	Cis_1M	lymphoblastoid	RTeQTL
rs1748197	DOCK7	cis	lesional skin	skin_eQTL

Chromatin state (count:56 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:62939800-63060200	Weak transcription	Small Intestine	intestine
2	chr1:62958200-63061000	Weak transcription	Lung	lung
3	chr1:63007200-63056200	Weak transcription	Brain Anterior Caudate	brain
4	chr1:63007200-63096200	Weak transcription	HUVEC	blood vessel
5	chr1:63010800-63078400	Weak transcription	A549	lung
6	chr1:63017800-63057600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
7	chr1:63021600-63058800	Weak transcription	Stomach Smooth Muscle	stomach
8	chr1:63021600-63061400	Weak transcription	Pancreas	Pancrea
9	chr1:63036800-63058600	Weak transcription	Fetal Brain Female	brain
10	chr1:63036800-63113600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr1:63038400-63087600	Weak transcription	NHEK	skin
12	chr1:63038400-63095600	Weak transcription	Brain Germinal Matrix	brain
13	chr1:63038600-63083000	Weak transcription	Duodenum Smooth Muscle	Duodenum
14	chr1:63039000-63063400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr1:63039200-63095200	Weak transcription	Ovary	ovary
16	chr1:63041000-63095200	Weak transcription	Fetal Muscle Leg	muscle
17	chr1:63041000-63095600	Weak transcription	Fetal Stomach	stomach
18	chr1:63041400-63059000	Weak transcription	Aorta	Aorta
19	chr1:63042200-63083600	Weak transcription	Fetal Muscle Trunk	muscle
20	chr1:63042400-63056200	Weak transcription	Adipose Nuclei	Adipose
21	chr1:63043400-63056400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr1:63044000-63076000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
23	chr1:63047600-63077000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr1:63050600-63083800	Weak transcription	Rectal Mucosa Donor 29	rectum
25	chr1:63051000-63066400	Weak transcription	NHLF	lung
26	chr1:63051400-63059400	Weak transcription	Pancreatic Islets	Pancreatic Islet
27	chr1:63051400-63062800	Weak transcription	Psoas Muscle	Psoas
28	chr1:63051800-63057600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr1:63051800-63075800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
30	chr1:63051800-63077000	Weak transcription	Primary hematopoietic stem cells	blood
31	chr1:63051800-63083400	Weak transcription	Fetal Lung	lung
32	chr1:63051800-63096000	Weak transcription	Left Ventricle	heart
33	chr1:63052000-63062200	Weak transcription	Cortex derived primary cultured neurospheres	brain
34	chr1:63052400-63062400	Weak transcription	Fetal Intestine Small	intestine
35	chr1:63052400-63083800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr1:63052600-63058200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
37	chr1:63052600-63059400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr1:63052600-63077200	Weak transcription	HSMM	muscle
39	chr1:63052600-63084400	Weak transcription	Rectal Mucosa Donor 31	rectum
40	chr1:63052800-63059600	Weak transcription	HUES64 Cell Line	embryonic stem cell
41	chr1:63052800-63062400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr1:63052800-63067000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
43	chr1:63053000-63056400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
44	chr1:63053000-63068000	Weak transcription	NHDF-Ad	bronchial
45	chr1:63053200-63056400	Enhancers	Osteobl	bone
46	chr1:63053600-63057800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr1:63053800-63056600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
48	chr1:63054600-63064800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
49	chr1:63054800-63079800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
50	chr1:63054800-63087600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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