The 2.0 version of rSNPBase

Variant report

Variant rs1184547
Chromosome Location chr1:63007228-63007229
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62939600-63040600 Weak transcription Aorta Aorta
2 chr1:62939800-63044400 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:62939800-63060200 Weak transcription Small Intestine intestine
4 chr1:62941600-63011800 Weak transcription Brain Hippocampus Middle brain
5 chr1:62941800-63030200 Weak transcription Brain Angular Gyrus brain
6 chr1:62954000-63053400 Weak transcription Fetal Brain Male brain
7 chr1:62957800-63050200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:62958200-63010800 Weak transcription Brain Substantia Nigra brain
9 chr1:62958200-63061000 Weak transcription Lung lung
10 chr1:62960400-63011800 Weak transcription Pancreas Pancrea
11 chr1:62979200-63026200 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr1:62979600-63030200 Weak transcription NHEK skin
13 chr1:62982800-63010200 Weak transcription A549 lung
14 chr1:62984200-63028000 Weak transcription Esophagus oesophagus
15 chr1:62985400-63026200 Weak transcription Primary B cells from cord blood blood
16 chr1:62991000-63027200 Weak transcription Brain Cingulate Gyrus brain
17 chr1:62991200-63010600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:62991200-63025800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr1:62991400-63010200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr1:62993000-63022000 Weak transcription GM12878-XiMat blood
21 chr1:62994000-63051000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr1:62994800-63028600 Weak transcription Right Ventricle heart
23 chr1:62995000-63030200 Weak transcription Spleen Spleen
24 chr1:62997400-63008600 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr1:62997400-63008800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:62997600-63007600 Strong transcription Fetal Muscle Leg muscle
27 chr1:62998000-63008600 Strong transcription Fetal Intestine Large intestine
28 chr1:62998000-63015400 Weak transcription Colonic Mucosa Colon
29 chr1:62998200-63009400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:62998200-63009600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr1:62998400-63009000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr1:62998600-63022000 Weak transcription Fetal Heart heart
33 chr1:62998600-63024400 Weak transcription Rectal Smooth Muscle rectum
34 chr1:62999400-63009400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr1:63000200-63008400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr1:63000200-63037000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr1:63000200-63054400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr1:63000600-63025400 Weak transcription Psoas Muscle Psoas
39 chr1:63000800-63009600 Strong transcription NHDF-Ad bronchial
40 chr1:63001400-63017800 Weak transcription Fetal Stomach stomach
41 chr1:63001400-63018200 Weak transcription HMEC breast
42 chr1:63001400-63028400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr1:63002200-63021200 Weak transcription Stomach Smooth Muscle stomach
44 chr1:63002400-63008600 Strong transcription Duodenum Mucosa Duodenum
45 chr1:63002600-63009400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr1:63002600-63018000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr1:63002800-63022600 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr1:63003000-63037400 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr1:63003200-63022000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
50 chr1:63003200-63024800 Weak transcription Brain Germinal Matrix brain

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Last update: Aug 31, 2015