The 2.0 version of rSNPBase

Variant report

Variant rs1168097
Chromosome Location chr1:63120371-63120372
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:63082200-63121000 Weak transcription Primary T helper cells PMA-I stimulated --
2 chr1:63082800-63132600 Weak transcription H1 Cell Line embryonic stem cell
3 chr1:63084800-63121000 Weak transcription Small Intestine intestine
4 chr1:63088000-63134600 Weak transcription H9 Cell Line embryonic stem cell
5 chr1:63096200-63121000 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr1:63096800-63129400 Weak transcription Esophagus oesophagus
7 chr1:63098000-63121400 Weak transcription HUVEC blood vessel
8 chr1:63099600-63122800 Weak transcription Brain Angular Gyrus brain
9 chr1:63099600-63137000 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr1:63107200-63120400 Weak transcription Colon Smooth Muscle Colon
11 chr1:63107200-63121000 Weak transcription Brain Hippocampus Middle brain
12 chr1:63107200-63122600 Weak transcription Brain Inferior Temporal Lobe brain
13 chr1:63107200-63122600 Weak transcription Gastric stomach
14 chr1:63107400-63120800 Weak transcription Thymus Thymus
15 chr1:63107400-63121400 Weak transcription HSMMtube muscle
16 chr1:63107400-63122400 Weak transcription Left Ventricle heart
17 chr1:63107400-63122800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr1:63107400-63122800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:63107400-63122800 Weak transcription Lung lung
20 chr1:63107400-63124800 Weak transcription Right Ventricle heart
21 chr1:63107400-63129600 Weak transcription NHLF lung
22 chr1:63107400-63132200 Weak transcription Brain Germinal Matrix brain
23 chr1:63107400-63151200 Weak transcription Pancreas Pancrea
24 chr1:63107600-63147800 Weak transcription NHEK skin
25 chr1:63108800-63151200 Weak transcription Fetal Stomach stomach
26 chr1:63109000-63124200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr1:63109000-63130600 Weak transcription Fetal Intestine Small intestine
28 chr1:63109000-63147800 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr1:63109200-63143000 Weak transcription Fetal Muscle Leg muscle
30 chr1:63109200-63150200 Weak transcription Fetal Brain Male brain
31 chr1:63109400-63120400 Weak transcription Brain Cingulate Gyrus brain
32 chr1:63109400-63121800 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr1:63109600-63121200 Weak transcription Psoas Muscle Psoas
34 chr1:63110200-63126200 Weak transcription NH-A brain
35 chr1:63110200-63140800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr1:63110600-63120800 Weak transcription Primary B cells from peripheral blood blood
37 chr1:63111000-63122800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr1:63111000-63124200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr1:63111400-63129800 Weak transcription Primary T cells from cord blood blood
40 chr1:63111400-63150200 Weak transcription Fetal Lung lung
41 chr1:63111800-63122600 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr1:63112400-63137600 Weak transcription Fetal Intestine Large intestine
43 chr1:63112400-63140800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:63112400-63142400 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr1:63112400-63142800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr1:63112400-63152400 Weak transcription Fetal Muscle Trunk muscle
47 chr1:63113200-63122800 Weak transcription Brain Anterior Caudate brain
48 chr1:63113200-63134600 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr1:63113400-63121400 Weak transcription Muscle Satellite Cultured Cells --
50 chr1:63113400-63128000 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015