The 2.0 version of rSNPBase

Variant report

Variant rs12023489
Chromosome Location chr1:62923858-62923859
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62904200-62931400 Weak transcription HSMMtube muscle
2 chr1:62904200-62940000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:62904800-62931600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr1:62905400-62926800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:62906000-62925200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr1:62907000-62928000 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr1:62907200-62924000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr1:62907200-62924200 Strong transcription Duodenum Mucosa Duodenum
9 chr1:62907400-62924000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr1:62907400-62924000 Strong transcription Rectal Mucosa Donor 31 rectum
11 chr1:62907400-62924200 Strong transcription Muscle Satellite Cultured Cells --
12 chr1:62909800-62977000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:62910200-62936000 Weak transcription Aorta Aorta
14 chr1:62910800-62924000 Strong transcription Dnd41 blood
15 chr1:62911200-62924000 Strong transcription Primary hematopoietic stem cells short term culture blood
16 chr1:62911200-62924000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:62911400-62931400 Weak transcription Fetal Brain Male brain
18 chr1:62911600-62938000 Weak transcription Placenta Amnion Placenta Amnion
19 chr1:62911800-62924600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr1:62912000-62931600 Strong transcription Breast Myoepithelial Primary Cells Breast
21 chr1:62912200-62930400 Weak transcription Ovary ovary
22 chr1:62914400-62935400 Weak transcription Brain Substantia Nigra brain
23 chr1:62915400-62940800 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr1:62915400-62966600 Weak transcription Primary T cells fromperipheralblood blood
25 chr1:62915600-62929800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr1:62915600-62930400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr1:62915800-62937000 Weak transcription Esophagus oesophagus
28 chr1:62916000-62940800 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr1:62916000-62977200 Weak transcription Right Ventricle heart
30 chr1:62916200-62960000 Weak transcription Spleen Spleen
31 chr1:62916200-62963200 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr1:62916400-62924000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr1:62916400-62936000 Weak transcription Left Ventricle heart
34 chr1:62916400-62940800 Weak transcription Fetal Heart heart
35 chr1:62916400-62941400 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr1:62916600-62935800 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr1:62916600-62937000 Weak transcription Colonic Mucosa Colon
38 chr1:62916600-62976600 Weak transcription Psoas Muscle Psoas
39 chr1:62916800-62935800 Weak transcription Colon Smooth Muscle Colon
40 chr1:62917000-62941200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr1:62917200-62940800 Weak transcription NHEK skin
42 chr1:62917400-62940200 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr1:62918800-62924200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr1:62918800-62950000 Weak transcription GM12878-XiMat blood
45 chr1:62918800-62950800 Weak transcription K562 blood
46 chr1:62919000-62925000 Weak transcription Hela-S3 cervix
47 chr1:62919000-62959200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr1:62919400-62924000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr1:62919400-62935800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr1:62919400-62935800 Weak transcription Skeletal Muscle Male skeletal muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015