Variant report

Variant rs598253
Chromosome Location chr1:62911341-62911342
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62903600-62914600 Weak transcription Spleen Spleen
2 chr1:62904000-62915200 Weak transcription Lung lung
3 chr1:62904200-62911400 Weak transcription H9 Cell Line embryonic stem cell
4 chr1:62904200-62911400 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:62904200-62913000 Weak transcription Brain Cingulate Gyrus brain
6 chr1:62904200-62914200 Weak transcription Colonic Mucosa Colon
7 chr1:62904200-62914600 Weak transcription Gastric stomach
8 chr1:62904200-62915400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr1:62904200-62917800 Weak transcription Pancreas Pancrea
10 chr1:62904200-62931400 Weak transcription HSMMtube muscle
11 chr1:62904200-62940000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr1:62904400-62914600 Weak transcription Psoas Muscle Psoas
13 chr1:62904600-62911800 Weak transcription Brain Inferior Temporal Lobe brain
14 chr1:62904600-62913000 Weak transcription Brain Substantia Nigra brain
15 chr1:62904600-62916400 Weak transcription Stomach Mucosa stomach
16 chr1:62904800-62914600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:62904800-62931600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:62905200-62915000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:62905400-62912200 Weak transcription Brain Hippocampus Middle brain
20 chr1:62905400-62926800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr1:62905600-62923200 Strong transcription HUES64 Cell Line embryonic stem cell
22 chr1:62905800-62919400 Strong transcription H1 Cell Line embryonic stem cell
23 chr1:62906000-62913000 Weak transcription Fetal Heart heart
24 chr1:62906000-62922200 Strong transcription HUES48 Cell Line embryonic stem cell
25 chr1:62906000-62923400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr1:62906000-62925200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr1:62906200-62921200 Strong transcription HUES6 Cell Line embryonic stem cell
28 chr1:62906200-62923200 Strong transcription iPS-18 Cell Line embryonic stem cell
29 chr1:62906200-62923400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr1:62906400-62911400 Weak transcription Ovary ovary
31 chr1:62906400-62914600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
32 chr1:62906400-62918800 Strong transcription K562 blood
33 chr1:62906400-62919000 Strong transcription iPS-20b Cell Line embryonic stem cell
34 chr1:62906400-62923400 Strong transcription Placenta Placenta
35 chr1:62906600-62922600 Strong transcription Monocytes-CD14+_RO01746 blood
36 chr1:62906800-62915400 Strong transcription Primary T cells fromperipheralblood blood
37 chr1:62906800-62919000 Strong transcription Hela-S3 cervix
38 chr1:62906800-62920000 Strong transcription Fetal Thymus thymus
39 chr1:62907000-62911400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr1:62907000-62912400 Strong transcription A549 lung
41 chr1:62907000-62917400 Strong transcription Primary T regulatory cells fromperipheralblood blood
42 chr1:62907000-62918400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr1:62907000-62918600 Strong transcription Primary T helper cells fromperipheralblood blood
44 chr1:62907000-62918600 Strong transcription Fetal Lung lung
45 chr1:62907000-62918600 Strong transcription HSMM muscle
46 chr1:62907000-62918800 Strong transcription Primary B cells from peripheral blood blood
47 chr1:62907000-62919400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr1:62907000-62919800 Strong transcription Cortex derived primary cultured neurospheres brain
49 chr1:62907000-62919800 Strong transcription Rectal Mucosa Donor 29 rectum
50 chr1:62907000-62923400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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