The 2.0 version of rSNPBase

Variant report

Variant rs10889349
Chromosome Location chr1:63081919-63081920
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:63007200-63096200 Weak transcription HUVEC blood vessel
2 chr1:63036800-63113600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr1:63038400-63087600 Weak transcription NHEK skin
4 chr1:63038400-63095600 Weak transcription Brain Germinal Matrix brain
5 chr1:63038600-63083000 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr1:63039200-63095200 Weak transcription Ovary ovary
7 chr1:63041000-63095200 Weak transcription Fetal Muscle Leg muscle
8 chr1:63041000-63095600 Weak transcription Fetal Stomach stomach
9 chr1:63042200-63083600 Weak transcription Fetal Muscle Trunk muscle
10 chr1:63050600-63083800 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr1:63051800-63083400 Weak transcription Fetal Lung lung
12 chr1:63051800-63096000 Weak transcription Left Ventricle heart
13 chr1:63052400-63083800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr1:63052600-63084400 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr1:63054800-63087600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr1:63057000-63082800 Weak transcription Brain Anterior Caudate brain
17 chr1:63057000-63083800 Weak transcription Adipose Nuclei Adipose
18 chr1:63063200-63085000 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr1:63065400-63087800 Weak transcription Stomach Mucosa stomach
20 chr1:63066800-63112200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr1:63068400-63095200 Weak transcription Duodenum Mucosa Duodenum
22 chr1:63070400-63082800 Weak transcription NHDF-Ad bronchial
23 chr1:63072000-63089400 Weak transcription Fetal Kidney kidney
24 chr1:63072000-63095800 Weak transcription Primary T cells from cord blood blood
25 chr1:63074400-63095600 Weak transcription Fetal Intestine Small intestine
26 chr1:63074400-63099000 Weak transcription Brain Hippocampus Middle brain
27 chr1:63074600-63084400 Weak transcription Fetal Intestine Large intestine
28 chr1:63075000-63083000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr1:63075200-63095200 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr1:63075400-63095600 Weak transcription Fetal Brain Female brain
31 chr1:63075400-63095600 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr1:63075600-63087600 Weak transcription HSMMtube muscle
33 chr1:63075600-63095600 Weak transcription Stomach Smooth Muscle stomach
34 chr1:63075600-63106600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr1:63075800-63095800 Weak transcription Aorta Aorta
36 chr1:63075800-63099000 Weak transcription Fetal Brain Male brain
37 chr1:63076200-63086000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr1:63076400-63097000 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr1:63077200-63083400 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr1:63077200-63087600 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr1:63077400-63095200 Weak transcription Primary hematopoietic stem cells blood
42 chr1:63077600-63082800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr1:63077600-63084400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr1:63078000-63083600 Weak transcription Dnd41 blood
45 chr1:63078600-63083600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr1:63078600-63087600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr1:63078800-63083000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr1:63078800-63083000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr1:63078800-63083800 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr1:63079000-63087600 Weak transcription HMEC breast

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Last update: Aug 31, 2015