Variant report

Variant	rs630144
Chromosome Location	chr1:62918864-62918865
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:62917044..62918978-chr1:62973057..62975934,2	K562	blood:
2	chr1:62918421..62920309-chr1:62921634..62923653,3	K562	blood:

Extended variants
information (count: 203 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:202)

rs_ID	r²[population]
rs1002687	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1007205	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.81[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs10157265	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10158897	0.91[CEU][hapmap];0.89[JPT][hapmap];0.84[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10159255	0.91[CEU][hapmap];0.89[JPT][hapmap];0.89[EUR][1000 genomes]
rs10493322	0.96[CEU][hapmap];0.89[JPT][hapmap];0.84[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10789112	0.98[EUR][1000 genomes]
rs10789113	0.96[EUR][1000 genomes]
rs10789117	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10789118	0.96[CEU][hapmap];0.90[JPT][hapmap];0.87[EUR][1000 genomes]
rs10789119	0.95[CEU][hapmap];0.89[JPT][hapmap];0.87[EUR][1000 genomes]
rs10789120	0.83[EUR][1000 genomes]
rs10889330	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10889331	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10889332	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10889333	0.95[CEU][hapmap];0.89[JPT][hapmap];0.98[EUR][1000 genomes]
rs10889334	0.96[CEU][hapmap];0.90[JPT][hapmap];0.98[EUR][1000 genomes]
rs10889335	0.91[CEU][hapmap];0.89[JPT][hapmap];0.88[EUR][1000 genomes]
rs10889337	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10889338	0.96[EUR][1000 genomes]
rs10889339	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10889340	0.80[AFR][1000 genomes];0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10889342	0.85[EUR][1000 genomes]
rs10889343	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10889344	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10889347	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10889348	0.85[EUR][1000 genomes]
rs10889349	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10889350	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10889352	0.95[CEU][hapmap];0.89[JPT][hapmap];0.87[EUR][1000 genomes]
rs10889353	0.95[CEU][hapmap];0.89[JPT][hapmap];0.85[EUR][1000 genomes]
rs10889354	0.84[EUR][1000 genomes]
rs11207969	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11207970	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11207972	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11207974	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11207976	0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11207977	0.96[EUR][1000 genomes]
rs11207979	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11207980	0.96[EUR][1000 genomes]
rs11207981	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11207982	0.96[EUR][1000 genomes]
rs11207983	0.80[AFR][1000 genomes];0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11207984	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11207985	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11207986	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11207990	1.00[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11207992	0.96[CEU][hapmap];0.89[JPT][hapmap];0.89[EUR][1000 genomes]
rs11207995	0.95[CEU][hapmap];0.89[JPT][hapmap];0.88[EUR][1000 genomes]
rs11207996	0.88[EUR][1000 genomes]
rs11207997	0.91[CEU][hapmap];0.93[CHB][hapmap];0.90[JPT][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11207998	0.90[JPT][hapmap]
rs11207999	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11208000	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11208001	0.84[EUR][1000 genomes]
rs11485618	0.95[CEU][hapmap];0.90[JPT][hapmap];0.87[EUR][1000 genomes]
rs11577840	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11588261	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1167996	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1167998	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1168001	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1168002	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1168003	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1168009	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1168010	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1168013	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1168015	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1168017	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1168018	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1168020	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1168021	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1168022	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.81[AFR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1168023	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.82[AFR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1168026	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1168027	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1168028	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1168029	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1168030	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1168031	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1168032	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1168034	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1168036	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1168040	0.95[CEU][hapmap];0.93[CHB][hapmap];0.90[YRI][hapmap];0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1168041	0.90[JPT][hapmap]
rs1168042	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1168044	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1168045	1.00[CEU][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1168046	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1168047	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1168050	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1168085	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes]
rs1168086	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.85[EUR][1000 genomes]
rs1168089	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes]
rs1168093	0.85[EUR][1000 genomes]
rs1168097	0.85[EUR][1000 genomes]
rs1168098	0.85[EUR][1000 genomes]
rs1168099	0.85[EUR][1000 genomes]
rs1168102	0.85[EUR][1000 genomes]
rs1168103	0.85[EUR][1000 genomes]
rs1168124	0.84[EUR][1000 genomes]
rs1168132	0.81[EUR][1000 genomes]
rs1177541	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1179765	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1183260	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1184547	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1184865	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12023489	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12025800	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12029068	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12037659	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12038768	0.89[EUR][1000 genomes]
rs12039115	1.00[JPT][hapmap]
rs12042319	0.96[CEU][hapmap];0.89[JPT][hapmap];0.88[EUR][1000 genomes]
rs12047226	0.87[EUR][1000 genomes]
rs12048208	0.89[JPT][hapmap]
rs12062275	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12074528	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12090886	1.00[CEU][hapmap];0.85[YRI][hapmap];0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12116574	0.95[CEU][hapmap];0.89[JPT][hapmap];0.89[EUR][1000 genomes]
rs12124281	0.84[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs12239736	0.82[EUR][1000 genomes]
rs12403207	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1305520	0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1305521	0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1472257	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1570694	0.95[CEU][hapmap];0.89[JPT][hapmap];0.87[EUR][1000 genomes]
rs1627591	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1629122	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1690755	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1690761	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1690766	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1748195	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1748197	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.87[EUR][1000 genomes]
rs1748199	1.00[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.87[EUR][1000 genomes]
rs1748200	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1748201	1.00[CEU][hapmap];0.93[CHB][hapmap];0.90[JPT][hapmap];0.90[YRI][hapmap];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1781195	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1781212	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1781221	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap]
rs1979722	0.90[CEU][hapmap];0.98[EUR][1000 genomes]
rs2029763	0.95[CEU][hapmap];0.89[JPT][hapmap];0.96[EUR][1000 genomes]
rs2131925	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2131926	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2366636	0.87[EUR][1000 genomes]
rs2366638	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2479464	0.85[EUR][1000 genomes]
rs2489835	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs34152715	0.89[EUR][1000 genomes]
rs3850634	0.95[CEU][hapmap];0.89[JPT][hapmap];0.88[EUR][1000 genomes]
rs3913007	0.95[CEU][hapmap];0.89[JPT][hapmap];0.84[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4329540	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4350231	0.95[CEU][hapmap];0.89[JPT][hapmap];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4495740	0.85[EUR][1000 genomes]
rs4587594	0.84[EUR][1000 genomes]
rs4915838	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4915840	0.83[AFR][1000 genomes];0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs583609	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs597076	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs597078	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs597470	0.81[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs598253	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61471917	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs61775910	0.92[EUR][1000 genomes]
rs624660	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs624700	0.86[ASN][1000 genomes]
rs626787	1.00[CHB][hapmap];0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs631106	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs634341	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs636497	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs636523	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs637723	0.95[CEU][hapmap];0.87[CHB][hapmap];0.81[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs638305	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs641540	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs642845	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.95[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs656297	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6587976	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6587980	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs659656	0.96[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6657050	0.82[ASN][1000 genomes]
rs6675401	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6678483	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6690733	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6693353	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6696502	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs746735	0.85[EUR][1000 genomes]
rs7519785	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7520810	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7527004	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7534572	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7539035	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7547965	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7548877	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7555577	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs783291	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9436221	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9436222	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9436223	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9436661	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs993013	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs995000	0.95[CEU][hapmap];0.89[JPT][hapmap];0.87[EUR][1000 genomes]
rs998403	0.95[CEU][hapmap];0.89[JPT][hapmap];0.80[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs9988450	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1817371	chr1:62901935-63129697	Flanking Active TSS Active TSS Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs630144	DOCK7	Cis_1M	lymphoblastoid	RTeQTL
rs630144	DOCK7	cis	uninvolved skin	skin_eQTL
rs630144	DOCK7	cis	lesional skin	skin_eQTL

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:62904200-62931400	Weak transcription	HSMMtube	muscle
2	chr1:62904200-62940000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr1:62904800-62931600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr1:62905400-62926800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr1:62905600-62923200	Strong transcription	HUES64 Cell Line	embryonic stem cell
6	chr1:62905800-62919400	Strong transcription	H1 Cell Line	embryonic stem cell
7	chr1:62906000-62922200	Strong transcription	HUES48 Cell Line	embryonic stem cell
8	chr1:62906000-62923400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr1:62906000-62925200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr1:62906200-62921200	Strong transcription	HUES6 Cell Line	embryonic stem cell
11	chr1:62906200-62923200	Strong transcription	iPS-18 Cell Line	embryonic stem cell
12	chr1:62906200-62923400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr1:62906400-62919000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
14	chr1:62906400-62923400	Strong transcription	Placenta	Placenta
15	chr1:62906600-62922600	Strong transcription	Monocytes-CD14+_RO01746	blood
16	chr1:62906800-62919000	Strong transcription	Hela-S3	cervix
17	chr1:62906800-62920000	Strong transcription	Fetal Thymus	thymus
18	chr1:62907000-62919400	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
19	chr1:62907000-62919800	Strong transcription	Cortex derived primary cultured neurospheres	brain
20	chr1:62907000-62919800	Strong transcription	Rectal Mucosa Donor 29	rectum
21	chr1:62907000-62923400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr1:62907000-62923600	Strong transcription	Duodenum Smooth Muscle	Duodenum
23	chr1:62907000-62928000	Weak transcription	Pancreatic Islets	Pancreatic Islet
24	chr1:62907200-62920000	Strong transcription	Fetal Intestine Large	intestine
25	chr1:62907200-62921800	Strong transcription	Primary monocytes fromperipheralblood	blood
26	chr1:62907200-62923600	Strong transcription	Liver	Liver
27	chr1:62907200-62924000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr1:62907200-62924200	Strong transcription	Duodenum Mucosa	Duodenum
29	chr1:62907400-62919200	Strong transcription	HepG2	liver
30	chr1:62907400-62919800	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
31	chr1:62907400-62920200	Strong transcription	Brain Germinal Matrix	brain
32	chr1:62907400-62920200	Strong transcription	Fetal Muscle Trunk	muscle
33	chr1:62907400-62924000	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr1:62907400-62924000	Strong transcription	Rectal Mucosa Donor 31	rectum
35	chr1:62907400-62924200	Strong transcription	Muscle Satellite Cultured Cells	--
36	chr1:62907600-62920200	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
37	chr1:62909400-62923200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
38	chr1:62909800-62977000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr1:62910200-62936000	Weak transcription	Aorta	Aorta
40	chr1:62910400-62919000	Strong transcription	Fetal Brain Female	brain
41	chr1:62910400-62919400	Strong transcription	Skeletal Muscle Male	skeletal muscle
42	chr1:62910800-62921000	Strong transcription	Primary B cells from cord blood	blood
43	chr1:62910800-62924000	Strong transcription	Dnd41	blood
44	chr1:62911200-62924000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
45	chr1:62911200-62924000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
46	chr1:62911400-62920000	Strong transcription	Sigmoid Colon	Sigmoid Colon
47	chr1:62911400-62923800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
48	chr1:62911400-62931400	Weak transcription	Fetal Brain Male	brain
49	chr1:62911600-62938000	Weak transcription	Placenta Amnion	Placenta Amnion
50	chr1:62911800-62919000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood

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