The 2.0 version of rSNPBase

Variant report

Variant rs1168017
Chromosome Location chr1:63002551-63002552
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62939600-63040600 Weak transcription Aorta Aorta
2 chr1:62939800-63044400 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:62939800-63060200 Weak transcription Small Intestine intestine
4 chr1:62941600-63011800 Weak transcription Brain Hippocampus Middle brain
5 chr1:62941800-63030200 Weak transcription Brain Angular Gyrus brain
6 chr1:62954000-63003400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr1:62954000-63053400 Weak transcription Fetal Brain Male brain
8 chr1:62957800-63050200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:62958200-63010800 Weak transcription Brain Substantia Nigra brain
10 chr1:62958200-63061000 Weak transcription Lung lung
11 chr1:62960400-63004400 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr1:62960400-63011800 Weak transcription Pancreas Pancrea
13 chr1:62977000-63004800 Weak transcription NHLF lung
14 chr1:62979200-63026200 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr1:62979600-63030200 Weak transcription NHEK skin
16 chr1:62981400-63003400 Weak transcription Fetal Kidney kidney
17 chr1:62981600-63004600 Weak transcription Brain Inferior Temporal Lobe brain
18 chr1:62982800-63010200 Weak transcription A549 lung
19 chr1:62984200-63028000 Weak transcription Esophagus oesophagus
20 chr1:62984600-63005200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr1:62985400-63004600 Weak transcription HSMMtube muscle
22 chr1:62985400-63026200 Weak transcription Primary B cells from cord blood blood
23 chr1:62990400-63005400 Weak transcription Thymus Thymus
24 chr1:62990800-63006400 Weak transcription Hela-S3 cervix
25 chr1:62991000-63027200 Weak transcription Brain Cingulate Gyrus brain
26 chr1:62991200-63010600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:62991200-63025800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr1:62991400-63010200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr1:62993000-63022000 Weak transcription GM12878-XiMat blood
30 chr1:62994000-63003200 Weak transcription Osteobl bone
31 chr1:62994000-63051000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr1:62994400-63006800 Weak transcription HUVEC blood vessel
33 chr1:62994800-63028600 Weak transcription Right Ventricle heart
34 chr1:62995000-63030200 Weak transcription Spleen Spleen
35 chr1:62996200-63003600 Weak transcription H9 Cell Line embryonic stem cell
36 chr1:62996600-63004200 Weak transcription K562 blood
37 chr1:62996600-63006800 Weak transcription Brain Anterior Caudate brain
38 chr1:62996800-63003600 Weak transcription Liver Liver
39 chr1:62997200-63006400 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr1:62997400-63008600 Strong transcription Breast Myoepithelial Primary Cells Breast
41 chr1:62997400-63008800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr1:62997600-63005600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr1:62997600-63007600 Strong transcription Fetal Muscle Leg muscle
44 chr1:62998000-63008600 Strong transcription Fetal Intestine Large intestine
45 chr1:62998000-63015400 Weak transcription Colonic Mucosa Colon
46 chr1:62998200-63009400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr1:62998200-63009600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr1:62998400-63009000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr1:62998600-63002800 Weak transcription Muscle Satellite Cultured Cells --
50 chr1:62998600-63022000 Weak transcription Fetal Heart heart

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015