Variant report

Variant	rs12029068
Chromosome Location	chr1:62904295-62904296
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr1:62903692..62905802-chr1:63153946..63155842,2	K562	blood:
2	chr1:61519005..61521478-chr1:62902730..62905153,2	K562	blood:
3	chr1:62903198..62905557-chr1:63182808..63185122,2	K562	blood:
4	chr1:62903526..62905902-chr1:62994645..62996175,2	K562	blood:

Variant related genes	Relation type
ENSG00000116641	Chromatin interaction
ENSG00000235545	Chromatin interaction
ENSG00000162599	Chromatin interaction

Extended variants
information (count: 199 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:197)

rs_ID	r²[population]
rs1002687	0.80[AFR][1000 genomes];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1007205	0.81[AMR][1000 genomes]
rs10157265	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10158897	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10159255	0.89[EUR][1000 genomes]
rs10493322	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10789112	0.98[EUR][1000 genomes]
rs10789113	0.96[EUR][1000 genomes]
rs10789117	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10789118	0.87[EUR][1000 genomes]
rs10789119	0.87[EUR][1000 genomes]
rs10789120	0.83[EUR][1000 genomes]
rs10889330	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10889331	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10889332	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10889333	0.98[EUR][1000 genomes]
rs10889334	0.98[EUR][1000 genomes]
rs10889335	0.88[EUR][1000 genomes]
rs10889337	0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10889338	0.96[EUR][1000 genomes]
rs10889339	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10889340	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10889342	0.85[EUR][1000 genomes]
rs10889343	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10889344	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10889347	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10889348	0.85[EUR][1000 genomes]
rs10889349	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10889350	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10889352	0.87[EUR][1000 genomes]
rs10889353	0.85[EUR][1000 genomes]
rs10889354	0.84[EUR][1000 genomes]
rs11207969	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11207970	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11207972	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11207974	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11207976	0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11207977	0.96[EUR][1000 genomes]
rs11207979	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11207980	0.96[EUR][1000 genomes]
rs11207981	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11207982	0.96[EUR][1000 genomes]
rs11207983	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11207984	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11207985	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11207986	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11207990	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11207992	0.89[EUR][1000 genomes]
rs11207995	0.88[EUR][1000 genomes]
rs11207996	0.88[EUR][1000 genomes]
rs11207997	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11207999	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11208000	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11208001	0.84[EUR][1000 genomes]
rs11485618	0.87[EUR][1000 genomes]
rs11577840	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11588261	0.80[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1167996	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1167998	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1168001	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1168002	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1168003	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1168009	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1168010	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1168013	0.80[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1168015	0.80[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1168017	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1168018	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1168020	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1168021	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1168022	0.80[AFR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1168023	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1168026	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1168027	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1168028	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1168029	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1168030	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1168031	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1168032	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1168034	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1168036	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1168040	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1168042	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1168044	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1168045	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1168046	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1168047	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1168050	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1168085	0.85[EUR][1000 genomes]
rs1168086	0.85[EUR][1000 genomes]
rs1168089	0.85[EUR][1000 genomes]
rs1168093	0.85[EUR][1000 genomes]
rs1168097	0.85[EUR][1000 genomes]
rs1168098	0.85[EUR][1000 genomes]
rs1168099	0.85[EUR][1000 genomes]
rs1168102	0.85[EUR][1000 genomes]
rs1168103	0.85[EUR][1000 genomes]
rs1168124	0.84[EUR][1000 genomes]
rs1168132	0.81[EUR][1000 genomes]
rs1177541	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1179765	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1183260	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1184547	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1184865	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12023489	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12025800	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12037659	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12038768	0.89[EUR][1000 genomes]
rs12042319	0.88[EUR][1000 genomes]
rs12047226	0.87[EUR][1000 genomes]
rs12062275	0.80[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12074528	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12090886	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12116574	0.89[EUR][1000 genomes]
rs12124281	0.84[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs12239736	0.82[EUR][1000 genomes]
rs12239737	0.81[EUR][1000 genomes]
rs12403207	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1305520	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1305521	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1472257	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1570694	0.87[EUR][1000 genomes]
rs1627591	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1629122	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1690755	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1690761	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1690766	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1748195	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1748197	0.87[EUR][1000 genomes]
rs1748199	0.87[EUR][1000 genomes]
rs1748200	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1748201	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1781195	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1781212	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1979722	0.98[EUR][1000 genomes]
rs2029763	0.96[EUR][1000 genomes]
rs2131925	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2131926	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2366636	0.87[EUR][1000 genomes]
rs2366638	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2479464	0.85[EUR][1000 genomes]
rs2489835	0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs34152715	0.89[EUR][1000 genomes]
rs3850634	0.88[EUR][1000 genomes]
rs3913007	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4329540	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4350231	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4495740	0.85[EUR][1000 genomes]
rs4587594	0.84[EUR][1000 genomes]
rs4915838	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4915840	0.80[AFR][1000 genomes];0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs583609	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs597076	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs597078	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs597470	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs598253	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61471917	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs61775910	0.92[EUR][1000 genomes]
rs624660	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs624700	0.88[ASN][1000 genomes]
rs626787	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs630144	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs631106	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs634341	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs636497	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs636523	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs637723	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs638305	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs641540	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs642845	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs656297	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6587976	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6587980	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs659656	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6675401	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6678483	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6690733	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6693353	0.86[EUR][1000 genomes]
rs6696502	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs746735	0.85[EUR][1000 genomes]
rs7519785	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7520810	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7527004	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7534572	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7539035	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7547965	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7548877	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7555577	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs783291	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9436221	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9436222	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9436223	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9436661	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs993013	0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs995000	0.87[EUR][1000 genomes]
rs998403	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs9988450	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1013582	chr1:62723703-62910632	Flanking Active TSS Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	31 gene(s)	inside rSNPs	diseases
2	esv1817371	chr1:62901935-63129697	Flanking Active TSS Active TSS Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs12029068	DOCK7	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:62901000-62904400	Active TSS	Psoas Muscle	Psoas
2	chr1:62901000-62904600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr1:62901000-62904600	Active TSS	Fetal Kidney	kidney
4	chr1:62901000-62904600	Active TSS	Right Ventricle	heart
5	chr1:62901000-62904800	Active TSS	iPS-15b Cell Line	embryonic stem cell
6	chr1:62901000-62904800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr1:62901000-62904800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr1:62901000-62905000	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr1:62901000-62905000	Active TSS	HUES64 Cell Line	embryonic stem cell
10	chr1:62901000-62905000	Active TSS	HSMM	muscle
11	chr1:62901000-62905200	Active TSS	ES-I3 Cell Line	embryonic stem cell
12	chr1:62901000-62905200	Active TSS	A549	lung
13	chr1:62901000-62905600	Active TSS	HUES6 Cell Line	embryonic stem cell
14	chr1:62901000-62905800	Active TSS	NHLF	lung
15	chr1:62901000-62906200	Active TSS	GM12878-XiMat	blood
16	chr1:62901200-62904400	Active TSS	ES-WA7 Cell Line	embryonic stem cell
17	chr1:62901200-62904400	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
18	chr1:62901200-62904800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
19	chr1:62901400-62904400	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr1:62901400-62904400	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr1:62901400-62904600	Active TSS	iPS-18 Cell Line	embryonic stem cell
22	chr1:62901400-62904800	Active TSS	Fetal Thymus	thymus
23	chr1:62901400-62904800	Active TSS	Thymus	Thymus
24	chr1:62901400-62905000	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr1:62901400-62905000	Active TSS	NHDF-Ad	bronchial
26	chr1:62901400-62905800	Active TSS	K562	blood
27	chr1:62901400-62906000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr1:62901600-62904400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr1:62901600-62904600	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr1:62901600-62904600	Active TSS	Fetal Muscle Leg	muscle
31	chr1:62901600-62904800	Active TSS	Fetal Intestine Small	intestine
32	chr1:62901600-62905200	Active TSS	Hela-S3	cervix
33	chr1:62901800-62904600	Active TSS	Primary T cells fromperipheralblood	blood
34	chr1:62901800-62904600	Active TSS	Dnd41	blood
35	chr1:62901800-62905000	Active TSS	HMEC	breast
36	chr1:62902400-62905000	Flanking Active TSS	Primary hematopoietic stem cells	blood
37	chr1:62902600-62904400	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
38	chr1:62902800-62904600	Active TSS	Right Atrium	heart
39	chr1:62903400-62904400	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
40	chr1:62903400-62904800	Flanking Active TSS	Primary T cells from cord blood	blood
41	chr1:62903400-62904800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
42	chr1:62903400-62904800	Flanking Active TSS	Duodenum Mucosa	Duodenum
43	chr1:62903400-62905200	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
44	chr1:62903400-62905800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
45	chr1:62903600-62904400	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
46	chr1:62903600-62904400	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
47	chr1:62903600-62904400	Flanking Active TSS	Brain Angular Gyrus	brain
48	chr1:62903600-62904800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr1:62903600-62904800	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
50	chr1:62903600-62904800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links