The 2.0 version of rSNPBase

Variant report

Variant rs10889338
Chromosome Location chr1:62984897-62984898
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62939600-62999800 Weak transcription Gastric stomach
2 chr1:62939600-63040600 Weak transcription Aorta Aorta
3 chr1:62939800-63044400 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:62939800-63060200 Weak transcription Small Intestine intestine
5 chr1:62941000-63001000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr1:62941600-62998200 Weak transcription Fetal Heart heart
7 chr1:62941600-63011800 Weak transcription Brain Hippocampus Middle brain
8 chr1:62941800-63030200 Weak transcription Brain Angular Gyrus brain
9 chr1:62954000-63003400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr1:62954000-63053400 Weak transcription Fetal Brain Male brain
11 chr1:62957800-62998200 Weak transcription Primary T cells from cord blood blood
12 chr1:62957800-63050200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:62958200-63010800 Weak transcription Brain Substantia Nigra brain
14 chr1:62958200-63061000 Weak transcription Lung lung
15 chr1:62958400-62997600 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr1:62958400-62998200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:62960000-62998200 Weak transcription HMEC breast
18 chr1:62960200-62999800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:62960400-62985000 Weak transcription Colon Smooth Muscle Colon
20 chr1:62960400-62985000 Weak transcription HSMMtube muscle
21 chr1:62960400-63004400 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr1:62960400-63011800 Weak transcription Pancreas Pancrea
23 chr1:62961600-62993600 Weak transcription HUVEC blood vessel
24 chr1:62968400-63000200 Weak transcription Primary hematopoietic stem cells blood
25 chr1:62970600-62998200 Weak transcription Muscle Satellite Cultured Cells --
26 chr1:62973400-62995600 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr1:62973600-62993600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr1:62973600-62993800 Weak transcription Placenta Placenta
29 chr1:62977000-63004800 Weak transcription NHLF lung
30 chr1:62978600-62997600 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr1:62978600-62999600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr1:62978800-63002000 Weak transcription NH-A brain
33 chr1:62979000-62998000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr1:62979200-62997600 Weak transcription Fetal Muscle Trunk muscle
35 chr1:62979200-63026200 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr1:62979400-62999200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr1:62979600-62985000 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr1:62979600-62985000 Weak transcription HSMM muscle
39 chr1:62979600-62985000 Weak transcription Osteobl bone
40 chr1:62979600-62985200 Weak transcription NHDF-Ad bronchial
41 chr1:62979600-62990200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr1:62979600-62991000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr1:62979600-62994200 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr1:62979600-62998200 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr1:62979600-62998400 Weak transcription Ovary ovary
46 chr1:62979600-62999600 Weak transcription Stomach Smooth Muscle stomach
47 chr1:62979600-63000000 Weak transcription Left Ventricle heart
48 chr1:62979600-63030200 Weak transcription NHEK skin
49 chr1:62979800-62985000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr1:62981200-62987800 Weak transcription Liver Liver

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015