The 2.0 version of rSNPBase

Variant report

Variant rs2479464
Chromosome Location chr1:63130991-63130992
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:63082800-63132600 Weak transcription H1 Cell Line embryonic stem cell
2 chr1:63088000-63134600 Weak transcription H9 Cell Line embryonic stem cell
3 chr1:63099600-63137000 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr1:63107400-63132200 Weak transcription Brain Germinal Matrix brain
5 chr1:63107400-63151200 Weak transcription Pancreas Pancrea
6 chr1:63107600-63147800 Weak transcription NHEK skin
7 chr1:63108800-63151200 Weak transcription Fetal Stomach stomach
8 chr1:63109000-63147800 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr1:63109200-63143000 Weak transcription Fetal Muscle Leg muscle
10 chr1:63109200-63150200 Weak transcription Fetal Brain Male brain
11 chr1:63110200-63140800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:63111400-63150200 Weak transcription Fetal Lung lung
13 chr1:63112400-63137600 Weak transcription Fetal Intestine Large intestine
14 chr1:63112400-63140800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:63112400-63142400 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr1:63112400-63142800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:63112400-63152400 Weak transcription Fetal Muscle Trunk muscle
18 chr1:63113200-63134600 Weak transcription iPS-18 Cell Line embryonic stem cell
19 chr1:63113400-63132800 Weak transcription A549 lung
20 chr1:63113400-63142400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:63113400-63142400 Weak transcription Osteobl bone
22 chr1:63113600-63151000 Weak transcription Primary hematopoietic stem cells blood
23 chr1:63113600-63152800 Weak transcription Primary B cells from cord blood blood
24 chr1:63114000-63143000 Weak transcription Aorta Aorta
25 chr1:63118000-63131200 Weak transcription Ovary ovary
26 chr1:63118000-63150800 Weak transcription Duodenum Mucosa Duodenum
27 chr1:63118200-63147600 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr1:63119000-63148000 Weak transcription Fetal Brain Female brain
29 chr1:63119800-63132200 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr1:63119800-63132600 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr1:63119800-63132600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr1:63119800-63134600 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr1:63119800-63134800 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr1:63119800-63138800 Weak transcription Fetal Kidney kidney
35 chr1:63119800-63142400 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr1:63119800-63142400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr1:63119800-63150200 Weak transcription Adipose Nuclei Adipose
38 chr1:63120400-63136600 Weak transcription Dnd41 blood
39 chr1:63123000-63134800 Weak transcription HUES6 Cell Line embryonic stem cell
40 chr1:63123000-63140800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr1:63123000-63141200 Weak transcription Lung lung
42 chr1:63123000-63147800 Weak transcription Gastric stomach
43 chr1:63124400-63132200 Weak transcription Stomach Mucosa stomach
44 chr1:63126400-63132400 Weak transcription HepG2 liver
45 chr1:63126800-63147800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr1:63127000-63138800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr1:63127000-63142200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr1:63127400-63142400 Weak transcription HSMM muscle
49 chr1:63127800-63142400 Weak transcription NH-A brain
50 chr1:63128600-63137000 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015