The 2.0 version of rSNPBase

Variant report

Variant rs11674097
Chromosome Location chr2:86099921-86099922
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86066000-86106200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:86075400-86114000 Weak transcription Aorta Aorta
3 chr2:86079600-86106200 Weak transcription Brain Germinal Matrix brain
4 chr2:86081000-86112400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr2:86081600-86100600 Weak transcription NHDF-Ad bronchial
6 chr2:86086800-86113000 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr2:86087400-86101800 Weak transcription Fetal Brain Female brain
8 chr2:86088400-86105400 Weak transcription Osteobl bone
9 chr2:86088600-86111600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr2:86089000-86102600 Weak transcription Primary hematopoietic stem cells blood
11 chr2:86089800-86100000 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr2:86089800-86106000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr2:86089800-86106000 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr2:86090400-86102600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr2:86090400-86104600 Weak transcription Liver Liver
16 chr2:86090600-86109000 Weak transcription Fetal Stomach stomach
17 chr2:86090600-86110600 Weak transcription Fetal Muscle Trunk muscle
18 chr2:86091400-86101400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr2:86092200-86105200 Weak transcription Right Atrium heart
20 chr2:86093200-86106200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr2:86093400-86104600 Weak transcription Ovary ovary
22 chr2:86093400-86105800 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr2:86093400-86106200 Weak transcription Duodenum Mucosa Duodenum
24 chr2:86093400-86106800 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr2:86093400-86112400 Weak transcription Colonic Mucosa Colon
26 chr2:86093600-86111600 Weak transcription Colon Smooth Muscle Colon
27 chr2:86093800-86106000 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr2:86093800-86113000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr2:86094000-86103200 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr2:86094000-86105400 Weak transcription NH-A brain
31 chr2:86094400-86101400 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr2:86094800-86101400 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr2:86094800-86105400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr2:86094800-86106000 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr2:86095000-86102000 Strong transcription Primary T cells from cord blood blood
36 chr2:86095000-86103400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr2:86095200-86102600 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr2:86095200-86102800 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr2:86095400-86104000 Weak transcription A549 lung
40 chr2:86096200-86108400 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
41 chr2:86096800-86107600 Enhancers Brain Hippocampus Middle brain
42 chr2:86097000-86104400 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr2:86097200-86100600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr2:86097200-86102600 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr2:86097400-86102800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr2:86097600-86102200 Weak transcription Primary monocytes fromperipheralblood blood
47 chr2:86097600-86102600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr2:86097600-86102600 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr2:86097600-86103000 Weak transcription Placenta Placenta
50 chr2:86097600-86103200 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015